RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	STRN3	Q13033	797 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	GNPTAB	Q3T906	1256 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	OTUD6A	Q7L8S5	288 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	ZNF653	Q96CK0	615 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	GBP5	Q96PP8	586 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	PCDHGC5	Q9Y5F6	944 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	CRCP	O75575	148 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	TMOD1	P28289	359 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	PSMC6	P62333	389 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	CERS5	Q8N5B7	392 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	SH3GL2	Q99962	352 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	DDX47	Q9H0S4	455 aa	Known RBP	13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	KCTD10	Q9H3F6	313 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	G3BP2	Q9UN86	482 aa	Known RBP	13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	PITPNM2	Q9BZ72	1349 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029		I3L4J1	428 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	MX2	P20592	715 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	ERF	P50548	548 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	AP3B2	Q13367	1082 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	NXN	Q6DKJ4	435 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	PPP1R16B	Q96T49	567 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	MYCBP	Q99417	103 aa	Predicted RBP	13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	RNF181	Q9P0P0	153 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	INTU	Q9ULD6	942 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	PRR12	Q9ULL5	1215 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	MYO3B	Q8WXR4	1341 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	CASP5	P51878	434 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	GABPA	Q06546	454 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	MTMR2	Q13614	643 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	MTMR3	Q13615	1198 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	NBPF9	Q3BBW0	867 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	SUPT20HL1	Q3ZLR7	823 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	SH2D4B	Q5SQS7	431 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	LDHD	Q86WU2	507 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	ATP6V1G3	Q96LB4	118 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	RNPC3	Q96LT9	517 aa	Known RBP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	STK24	Q9Y6E0	443 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	PDE4DIP	Q5VU43	2346 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	COL16A1	Q07092	1604 aa	Predicted RBP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	GOLGA8IP	A6NC78	632 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	GOLGA8J	A6NMD2	632 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	GMNN	O75496	209 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	RPAIN	Q86UA6	219 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	KLHL29	Q96CT2	875 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	DYDC2	Q96IM9	177 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	CEP170P1	Q96L14	293 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	CFAP57	Q96MR6	1250 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	GAN	Q9H2C0	597 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	MLXIPL	Q9NP71	852 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	NAGPA	Q9UK23	515 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	PDXK	O00764	312 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	PON1	P27169	355 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	CLK2	P49760	499 aa	Known RBP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	DHX9	Q08211	1270 aa	Known RBP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	CUL1	Q13616	776 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	GIT2	Q14161	759 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	TRADD	Q15628	312 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	SNRNP48	Q6IEG0	339 aa	Known RBP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	RNF207	Q6ZRF8	634 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	CEP120	Q8N960	986 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	CCT6B	Q92526	530 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	VCX	Q9H320	206 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	TYW1	Q9NV66	732 aa	Known RBP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	COX16	Q9P0S2	106 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	ANKFY1	Q9P2R3	1169 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	NOVA2	Q9UNW9	492 aa	Known RBP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	TRPC6	Q9Y210	931 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	NOC2L	Q9Y3T9	749 aa	Known RBP	13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	MAD1L1	Q9Y6D9	718 aa		13.19	□□□□□ -0.3
TMPO-212	ENST00000556029	EDIL3	O43854	480 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	GMPS	P49915	693 aa	Predicted RBP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	CCDC14	Q49A88	953 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	MTERF2	Q49AM1	385 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	HYI	Q5T013	277 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	FAM160B2	Q86V87	743 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	PACS2	Q86VP3	889 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	FAM186B	Q8IYM0	893 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	ZNF668	Q96K58	619 aa	Predicted RBP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	RREB1	Q92766	1687 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	SLC12A3	P55017	1021 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	STYK1	Q6J9G0	422 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	GJB7	Q6PEY0	223 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	DEPTOR	Q8TB45	409 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.18	□□□□□ -0.3	2e-7	■■□□□ 14.3
TMPO-212	ENST00000556029	HERC5	Q9UII4	1024 aa	Known RBP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	ZNF233	A6NK53	670 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	RSPH10B2	B2RC85	870 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	SART1	O43290	800 aa	Known RBP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	RSPH10B	P0C881	870 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	MARK3	P27448	753 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	MARS	P56192	900 aa	Known RBP	13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	PPP2R5A	Q15172	486 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	ARSH	Q5FYA8	562 aa		13.18	□□□□□ -0.3
TMPO-212	ENST00000556029	ANGEL2	Q5VTE6	544 aa	Known RBP	13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms