RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 INO80BQ9C086 356 aaPredicted RBP16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 MARCH5Q9NX47 278 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 LIMD1Q9UGP4 676 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 USTQ9Y2C2 406 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 GVINP1Q7Z2Y8 2422 aa16.08■□□□□ 0.17
CHMP4BP1-201ENST00000556017 FAM205CA6NFA0 338 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PROB1E7EW31 1015 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 INPPL1O15357 1258 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 N4BP1O75113 896 aaKnown RBP16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CNPP09543 421 aaKnown RBP16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SKIP12755 728 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 RAB27AP51159 221 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 LAMTOR4Q0VGL1 99 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CWF19L1Q69YN2 538 aaKnown RBP16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PPP4R3AQ6IN85 833 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 GALNT17Q6IS24 598 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 TAS1R1Q7RTX1 841 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 GPR149Q86SP6 731 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ZBTB33Q86T24 672 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 TRIM22Q8IYM9 498 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 GBP3Q9H0R5 595 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 XPNPEP1Q9NQW7 623 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 RGL1Q9NZL6 768 aa16.08■□□□□ 0.16
CHMP4BP1-201ENST00000556017 F8W810 466 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 NRP1O14786 923 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ST18O60284 1047 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 REC8O95072 547 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CTDNEP1O95476 244 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 NPR3P17342 541 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CA8P35219 290 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 NUBP1P53384 320 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SCRN1Q12765 414 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 STK3Q13188 491 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 GIT2Q14161 759 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 LETM2Q2VYF4 491 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ATAT1Q5SQI0 421 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 KRT25Q7Z3Z0 450 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 TDRD5Q8NAT2 981 aaKnown RBP16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 FAM20AQ96MK3 541 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 RSAD1Q9HA92 442 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 BMP2KQ9NSY1 1161 aaPredicted RBP16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 MIOSQ9NXC5 875 aa16.07■□□□□ 0.16
CHMP4BP1-201ENST00000556017 EPB41L2O43491 1005 aaKnown RBP16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 GFRA3O60609 400 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 P4HBP07237 508 aaKnown RBP16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SRGAP2CP0DJJ0 459 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 NCLP19338 710 aaKnown RBP16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 RNASELQ05823 741 aaKnown RBP16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 DSC1Q08554 894 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 AMHR2Q16671 573 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 POTEGQ6S5H5 508 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ASCL5Q7RTU5 278 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SRGAP1Q7Z6B7 1085 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 FERMT3Q86UX7 667 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 C4orf19Q8IY42 314 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 COLGALT2Q8IYK4 626 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ATOH1Q92858 354 aaPredicted RBP16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 TNFRSF25Q93038 417 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CEP170P1Q96L14 293 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 LXNQ9BS40 222 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 EIF2AQ9BY44 585 aaKnown RBP16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 DBR1Q9UK59 544 aaKnown RBP16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CYP46A1Q9Y6A2 500 aa16.06■□□□□ 0.16
CHMP4BP1-201ENST00000556017 WNT7AO00755 349 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PAPLNO95428 1278 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 POMCP01189 267 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SSBP05455 408 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 EPHA7Q15375 998 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ASTLQ6HA08 431 aaPredicted RBP16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CABP7Q86V35 215 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 GSTCDQ8NEC7 633 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PGBD4Q96DM1 585 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 DYDC2Q96IM9 177 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 JPH2Q9BR39 696 aaPredicted RBP16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 TMEM175Q9BSA9 504 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SFXN1Q9H9B4 322 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 FRYLO94915 3013 aa16.05■□□□□ 0.16
CHMP4BP1-201ENST00000556017 STK36Q9NRP7 1315 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CNTNAP2Q9UHC6 1331 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CARNS1A5YM72 827 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CPLX1O14810 134 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 TBX3O15119 743 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PI15O43692 258 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 TSPAN1O60635 241 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SOD2P04179 222 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 YWHABP31946 246 aaKnown RBP16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 NBL1P41271 181 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PTENP60484 403 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 EMC2Q15006 297 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 KIAA0319Q5VV43 1072 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 RNF149Q8NC42 400 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PSPC1Q8WXF1 523 aaKnown RBP16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SLC7A3Q8WY07 619 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms