RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 RPAINQ86UA6 219 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 MAP4K3Q8IVH8 894 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 BICD1Q96G01 975 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 ZNF668Q96K58 619 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-208ENST00000555905 FDXACB1Q9BRP7 624 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-208ENST00000555905 GCOM2Q9BZD3 368 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-208ENST00000555905 INO80BQ9C086 356 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-208ENST00000555905 GBP3Q9H0R5 595 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 KCTD10Q9H3F6 313 aa12.11□□□□□ -0.47
TMEM260-208ENST00000555905 TRMT13Q9NUP7 481 aaKnown RBP12.11□□□□□ -0.47
TMEM260-208ENST00000555905 TYW1Q9NV66 732 aaKnown RBP12.11□□□□□ -0.47
TMEM260-208ENST00000555905 CGNQ9P2M7 1197 aaKnown RBP12.11□□□□□ -0.47
TMEM260-208ENST00000555905 ZMYM2Q9UBW7 1377 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 TRIM49BA6NDI0 452 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 HNRNPDLO14979 420 aaKnown RBP12.1□□□□□ -0.47
TMEM260-208ENST00000555905 TLR3O15455 904 aaKnown RBP12.1□□□□□ -0.47
TMEM260-208ENST00000555905 GPR32O75388 356 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 PRKCBP05771 671 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 RPL13P26373 211 aaKnown RBP12.1□□□□□ -0.47
TMEM260-208ENST00000555905 THPOP40225 353 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 CDK7P50613 346 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 CRYBB1P53674 252 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-208ENST00000555905 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
TMEM260-208ENST00000555905 PMS1P54277 932 aaKnown RBP12.1□□□□□ -0.47
TMEM260-208ENST00000555905 MRPS6P82932 125 aaKnown RBP12.1□□□□□ -0.47
TMEM260-208ENST00000555905 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 TTI2Q6NXR4 508 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 SRGAP1Q7Z6B7 1085 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 CSGALNACT2Q8N6G5 542 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 NOC3LQ8WTT2 800 aaKnown RBP12.1□□□□□ -0.47
TMEM260-208ENST00000555905 MRPL4Q9BYD3 311 aaKnown RBP12.1□□□□□ -0.47
TMEM260-208ENST00000555905 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 TRPV6Q9H1D0 765 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 ADAMTS10Q9H324 1103 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 IFT122Q9HBG6 1241 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 TRAF3IP3Q9Y228 551 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 GINS2Q9Y248 185 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 NFE2L3Q9Y4A8 694 aa12.1□□□□□ -0.47
TMEM260-208ENST00000555905 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 TGFB1I1O43294 461 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 B4GALT4O60513 344 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 CAND2O75155 1236 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 ERLIN2O94905 339 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 COL6A1P12109 1028 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 LIG4P49917 911 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 FKBP3Q00688 224 aaKnown RBP12.09□□□□□ -0.47
TMEM260-208ENST00000555905 MBTD1Q05BQ5 628 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
TMEM260-208ENST00000555905 PRPF4BQ13523 1007 aaKnown RBP12.09□□□□□ -0.47
TMEM260-208ENST00000555905 PCBP1Q15365 356 aaKnown RBP eCLIP12.09□□□□□ -0.47
TMEM260-208ENST00000555905 TMEM132AQ24JP5 1023 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 ZCWPW2Q504Y3 356 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 SLC39A5Q6ZMH5 540 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 TAS1R3Q7RTX0 852 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 CCDC155Q8N6L0 562 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 MED15Q96RN5 788 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 CTAGE1Q96RT6 745 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 OSMRQ99650 979 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 DUSP9Q99956 384 aaKnown RBP12.09□□□□□ -0.47
TMEM260-208ENST00000555905 CELF4Q9BZC1 486 aaKnown RBP12.09□□□□□ -0.47
TMEM260-208ENST00000555905 FZD8Q9H461 694 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 THAP9Q9H5L6 903 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 C11orf49Q9H6J7 331 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 AGPAT3Q9NRZ7 376 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 PRMT7Q9NVM4 692 aaPredicted RBP12.09□□□□□ -0.47
TMEM260-208ENST00000555905 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
TMEM260-208ENST00000555905 FSD2A1L4K1 749 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 DCDC2CA8MYV0 355 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 ACKR2O00590 384 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 CETN3O15182 167 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 PQBP1O60828 265 aaKnown RBP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 NR3C1P04150 777 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 DARSP14868 501 aaKnown RBP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 CDK11BP21127 795 aaKnown RBP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 SFPQP23246 707 aaKnown RBP eCLIP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 EIF4BP23588 611 aaKnown RBP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 NR2F2P24468 414 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 ADAM9Q13443 819 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 BFSP2Q13515 415 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 HSP90AA2PQ14568 343 aaPredicted RBP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 NCAPHQ15003 741 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 NFIL3Q16649 462 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 FAM187BQ17R55 369 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 UVSSAQ2YD98 709 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 C1orf53Q5VUE5 145 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 SLFN12LQ6IEE8 588 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 ARMCX5Q6P1M9 558 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 ZPBP2Q6X784 338 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 NECAB2Q7Z6G3 386 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 FAM114A1Q8IWE2 563 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 FAM126BQ8IXS8 530 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 DIS3LQ8TF46 1054 aaKnown RBP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 PAWRQ96IZ0 340 aaKnown RBP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 PRIMPOLQ96LW4 560 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 CEP63Q96MT8 703 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 SRRTQ9BXP5 876 aaKnown RBP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 MINDY3Q9H8M7 445 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 FANCLQ9NW38 375 aa12.08□□□□□ -0.48
TMEM260-208ENST00000555905 MAGEC2Q9UBF1 373 aaPredicted RBP12.08□□□□□ -0.48
TMEM260-208ENST00000555905 CDY2AQ9Y6F7 541 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms