RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 HACE1Q8IYU2 909 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 SLC43A3Q8NBI5 491 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 ENOX1Q8TC92 643 aaKnown RBP12.27□□□□□ -0.45
SHMT2-220ENST00000555634 PPP1R13LQ8WUF5 828 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 KCNN1Q92952 543 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 OSMRQ99650 979 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 FDXACB1Q9BRP7 624 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-220ENST00000555634 TCHPQ9BT92 498 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 CELF4Q9BZC1 486 aaKnown RBP12.27□□□□□ -0.45
SHMT2-220ENST00000555634 POLD4Q9HCU8 107 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 TRMT13Q9NUP7 481 aaKnown RBP12.27□□□□□ -0.45
SHMT2-220ENST00000555634 ANKFY1Q9P2R3 1169 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 PRKAG2Q9UGJ0 569 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 CNTNAP2Q9UHC6 1331 aa12.27□□□□□ -0.45
SHMT2-220ENST00000555634 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 N4BP3O15049 544 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 CDK11BP21127 795 aaKnown RBP12.26□□□□□ -0.45
SHMT2-220ENST00000555634 BMP6P22004 513 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 NR2F2P24468 414 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 AXLP30530 894 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-220ENST00000555634 STX17P56962 302 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 ZNF200P98182 395 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-220ENST00000555634 FKBP3Q00688 224 aaKnown RBP12.26□□□□□ -0.45
SHMT2-220ENST00000555634 MBTD1Q05BQ5 628 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 PAK2Q13177 524 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 MKRN4PQ13434 485 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-220ENST00000555634 KYAT1Q16773 422 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 ZNF568Q3ZCX4 644 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 CCDC40Q4G0X9 1142 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 CENPPQ6IPU0 288 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 NOTUMQ6P988 496 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 SLC39A5Q6ZMH5 540 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 ANKRD33Q7Z3H0 272 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 FAM126BQ8IXS8 530 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 RNF214Q8ND24 703 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 POMGNT1Q8WZA1 660 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 ZBTB10Q96DT7 871 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 CCDC51Q96ER9 411 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 CEP63Q96MT8 703 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 TOX2Q96NM4 488 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 TRIM6Q9C030 488 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-220ENST00000555634 THAP9Q9H5L6 903 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 CBX8Q9HC52 389 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 KIAA1586Q9HCI6 787 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 ATP11BQ9Y2G3 1177 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 NFE2L3Q9Y4A8 694 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 CDY2AQ9Y6F7 541 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 ADGRA3Q8IWK6 1321 aa12.26□□□□□ -0.45
SHMT2-220ENST00000555634 PDCD11Q14690 1871 aaKnown RBP12.25□□□□□ -0.45
SHMT2-220ENST00000555634 KIAA0100Q14667 2235 aaKnown RBP12.25□□□□□ -0.45
SHMT2-220ENST00000555634 ACKR2O00590 384 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 GPR182O15218 404 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 SLC16A3O15427 465 aaKnown RBP12.25□□□□□ -0.45
SHMT2-220ENST00000555634 CLDN3O15551 220 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 EXOC3O60645 756 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 RPS6KA5O75582 802 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 TOM1L1O75674 476 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 LDHAP00338 332 aaKnown RBP12.25□□□□□ -0.45
SHMT2-220ENST00000555634 NR3C1P04150 777 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 COL6A1P12109 1028 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 KRT13P13646 458 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 DARSP14868 501 aaKnown RBP12.25□□□□□ -0.45
SHMT2-220ENST00000555634 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
SHMT2-220ENST00000555634 MYBPC2Q14324 1141 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 GSE1Q14687 1217 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 NOLC1Q14978 699 aaKnown RBP eCLIP12.25□□□□□ -0.45
SHMT2-220ENST00000555634 SNX17Q15036 470 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 FAM187BQ17R55 369 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 DCAF4L1Q3SXM0 396 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 TRIM60Q495X7 471 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 FILIP1LQ4L180 1135 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 ATF7IP2Q5U623 682 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 MPZL3Q6UWV2 235 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 LRRC8DQ7L1W4 858 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 PAWRQ96IZ0 340 aaKnown RBP12.25□□□□□ -0.45
SHMT2-220ENST00000555634 CTAGE1Q96RT6 745 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 FIZ1Q96SL8 496 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 MSTO1Q9BUK6 570 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 CCDC113Q9H0I3 377 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 TRPV6Q9H1D0 765 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 AGPAT3Q9NRZ7 376 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-220ENST00000555634 TRAF3IP3Q9Y228 551 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 GRIN2DO15399 1336 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 ZMYM2Q9UBW7 1377 aa12.25□□□□□ -0.45
SHMT2-220ENST00000555634 TRIM49BA6NDI0 452 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 GPR32O75388 356 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 PIGRP01833 764 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 CLTBP09497 229 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 PRKCSHP14314 528 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-220ENST00000555634 SELPP16109 830 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 ANK1P16157 1881 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 GARTP22102 1010 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 EEF1GP26641 437 aaKnown RBP12.24□□□□□ -0.45
SHMT2-220ENST00000555634 CENPFP49454 3210 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 CYP2J2P51589 502 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
SHMT2-220ENST00000555634 ADAM9Q13443 819 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms