RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 P4HBP07237 508 aaKnown RBP17.46■□□□□ 0.39
TUBB3-209ENST00000555609 ABCB4P21439 1286 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 FLT3P36888 993 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 VAMP7P51809 220 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 KRT71Q3SY84 523 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 SWT1Q5T5J6 900 aaKnown RBP17.46■□□□□ 0.39
TUBB3-209ENST00000555609 PGM2Q96G03 612 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 CSRNP1Q96S65 589 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 LXNQ9BS40 222 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 CELF4Q9BZC1 486 aaKnown RBP17.46■□□□□ 0.39
TUBB3-209ENST00000555609 TMOD2Q9NZR1 351 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 PCDHAC2Q9Y5I4 1007 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 IGSF9BQ9UPX0 1349 aa17.46■□□□□ 0.39
TUBB3-209ENST00000555609 TRIM49P0CI25 452 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 TRIM49CP0CI26 452 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 CTNNA2P26232 953 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 SEC24CP53992 1094 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 JAG1P78504 1218 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 EPC2Q52LR7 807 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 OR2W6PQ8NHA6 318 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 STMN4Q9H169 189 aaPredicted RBP17.46■□□□□ 0.38
TUBB3-209ENST00000555609 DPH5Q9H2P9 285 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 PPANQ9NQ55 473 aaKnown RBP17.46■□□□□ 0.38
TUBB3-209ENST00000555609 MTRF1LQ9UGC7 380 aaKnown RBP17.46■□□□□ 0.38
TUBB3-209ENST00000555609 FEM1BQ9UK73 627 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 CAPN7Q9Y6W3 813 aa17.46■□□□□ 0.38
TUBB3-209ENST00000555609 IPO5O00410 1097 aaKnown RBP17.45■□□□□ 0.38
TUBB3-209ENST00000555609 FTLP02792 175 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-209ENST00000555609 PMS2P54278 862 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 ACTN3Q08043 901 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-209ENST00000555609 PRPF4BQ13523 1007 aaKnown RBP17.45■□□□□ 0.38
TUBB3-209ENST00000555609 CYP1B1Q16678 543 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 ARHGAP44Q17R89 818 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 PADI6Q6TGC4 694 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 JAMLQ86YT9 394 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 SAMD3Q8N6K7 520 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 ZSWIM1Q9BR11 485 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 TAOK3Q9H2K8 898 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 TDRD3Q9H7E2 651 aaKnown RBP17.45■□□□□ 0.38
TUBB3-209ENST00000555609 VCPKMTQ9H867 229 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 POLD4Q9HCU8 107 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 UBE2TQ9NPD8 197 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-209ENST00000555609 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
TUBB3-209ENST00000555609 CTTNBP2NLQ9P2B4 639 aa17.45■□□□□ 0.38
TUBB3-209ENST00000555609 ZNF646O15015 1829 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 K7ENM7 598 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 KIAA0391O15091 583 aaKnown RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 HNRNPH1P31943 449 aaKnown RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 PTGIRP43119 386 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 MAGOHP61326 146 aaKnown RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 RRP1BQ14684 758 aaKnown RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 SLMAPQ14BN4 828 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 PTPROQ16827 1216 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 C6orf118Q5T5N4 469 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 SEL1L2Q5TEA6 688 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 CCDC121Q6ZUS5 278 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 DAW1Q8N136 415 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 XXYLT1Q8NBI6 393 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 SUPT20HQ8NEM7 779 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 KAT2BQ92831 832 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 ZNF622Q969S3 477 aaKnown RBP eCLIP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 MAGOHBQ96A72 148 aaKnown RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 HOOK2Q96ED9 719 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 CABS1Q96KC9 395 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 SEPT11Q9NVA2 429 aaKnown RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 MTUS1Q9ULD2 1270 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 COG5Q9UP83 839 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 EMSYQ7Z589 1322 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 RBBP6Q7Z6E9 1792 aaKnown RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 COL11A2P13942 1736 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 GOLGA6L7A0A1B0GV03 622 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 H0YHG0 523 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 ARP10275 920 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 ALAS1P13196 640 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 PLS3P13797 630 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 ENPEPQ07075 957 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 ADCY2Q08462 1091 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 DENND2CQ68D51 928 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 CYFIP1Q7L576 1253 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 MIER3Q7Z3K6 550 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 COL23A1Q86Y22 540 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 RAPGEF5Q92565 580 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 TRIM51Q9BSJ1 452 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 TAS2R14Q9NYV8 317 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 WRAP73Q9P2S5 460 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-209ENST00000555609 ATP8A1Q9Y2Q0 1164 aa17.44■□□□□ 0.38
TUBB3-209ENST00000555609 ZBTB39O15060 712 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 TBC1D12O60347 775 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 HSD17B4P51659 736 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 GTF2A1P52655 376 aaPredicted RBP17.43■□□□□ 0.38
TUBB3-209ENST00000555609 SMTNP53814 917 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 GTF2BQ00403 316 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 KSR1Q8IVT5 923 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 FAM71AQ8IYT1 594 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 CACNA2D3Q8IZS8 1091 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 SPICE1Q8N0Z3 855 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 FAM151AQ8WW52 585 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 ALG3Q92685 438 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 HVCN1Q96D96 273 aa17.43■□□□□ 0.38
TUBB3-209ENST00000555609 IKZF4Q9H2S9 585 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms