RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 HTR4Q13639 388 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 RTN1Q16799 776 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 KIAA0319Q5VV43 1072 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 PPP1R18Q6NYC8 613 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 TSSK4Q6SA08 328 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 PARM1Q6UWI2 310 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 SGMS1Q86VZ5 419 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 ZNF710Q8N1W2 664 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 URGCPQ8TCY9 931 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 FGF14Q92915 247 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 NXPE3Q969Y0 559 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 LENG9Q96B70 501 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 NLRP4Q96MN2 994 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 CEP89Q96ST8 783 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 TRAIPQ9BWF2 469 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 UNC45AQ9H3U1 944 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 FAM217BQ9NTX9 383 aaPredicted RBP9.43□□□□□ -0.9
NEK9-206ENST00000555537 MARCH5Q9NX47 278 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 MIOSQ9NXC5 875 aa9.43□□□□□ -0.9
NEK9-206ENST00000555537 SEPT9Q9UHD8 586 aaPredicted RBP9.43□□□□□ -0.9
NEK9-206ENST00000555537 RALYQ9UKM9 306 aaKnown RBP9.43□□□□□ -0.9
NEK9-206ENST00000555537 EP300Q09472 2414 aaPredicted RBP9.43□□□□□ -0.9
NEK9-206ENST00000555537 DDX11L8A8MPP1 907 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 MSH4O15457 936 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 LAMTOR5O43504 91 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 STBD1O95210 358 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 URODP06132 367 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 ADH1AP07327 375 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 RPL17P18621 184 aaKnown RBP9.42□□□□□ -0.9
NEK9-206ENST00000555537 SFPQP23246 707 aaKnown RBP eCLIP9.42□□□□□ -0.9
NEK9-206ENST00000555537 CDC27P30260 824 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 NTHL1P78549 312 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 UBXN2BQ14CS0 331 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 CREB3L3Q68CJ9 461 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 APOA5Q6Q788 366 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 MRPL10Q7Z7H8 261 aaKnown RBP9.42□□□□□ -0.9
NEK9-206ENST00000555537 ATRIPQ8WXE1 791 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 PGBD4Q96DM1 585 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 TMEM175Q9BSA9 504 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 NIFKQ9BYG3 293 aaKnown RBP9.42□□□□□ -0.9
NEK9-206ENST00000555537 LSG1Q9H089 658 aaKnown RBP9.42□□□□□ -0.9
NEK9-206ENST00000555537 RNF39Q9H2S5 420 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 RSAD1Q9HA92 442 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 RXFP1Q9HBX9 757 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 SLC2A4RGQ9NR83 387 aa9.42□□□□□ -0.9
NEK9-206ENST00000555537 RBM28Q9NW13 759 aaKnown RBP9.42□□□□□ -0.9
NEK9-206ENST00000555537 FANCMQ8IYD8 2048 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 IGKV6-21A0A0C4DH24 114 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 KANSL1LA0AUZ9 987 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 CARNS1A5YM72 827 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 FAM170BA6NMN3 283 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 ZBTB43O43298 467 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 TGM5O43548 720 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 SRGAP2CP0DJJ0 459 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 TGM1P22735 817 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 ADD1P35611 737 aaKnown RBP9.41□□□□□ -0.9
NEK9-206ENST00000555537 GLUD2P49448 558 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 DNM2P50570 870 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 RAB27AP51159 221 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 CDC42EP1Q00587 391 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 SETQ01105 290 aaPredicted RBP9.41□□□□□ -0.9
NEK9-206ENST00000555537 NECTIN1Q15223 517 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 ST3GAL2Q16842 350 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 PFKFB3Q16875 520 aaPredicted RBP9.41□□□□□ -0.9
NEK9-206ENST00000555537 SLC44A4Q53GD3 710 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 UBXN11Q5T124 520 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 CYP26C1Q6V0L0 522 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 GRASPQ7Z6J2 395 aaPredicted RBP9.41□□□□□ -0.9
NEK9-206ENST00000555537 COLGALT2Q8IYK4 626 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 RABGGTAQ92696 567 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 CCDC136Q96JN2 1154 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 HERC2P3Q9BVR0 1158 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 PRKD2Q9BZL6 878 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 INO80BQ9C086 356 aaPredicted RBP9.41□□□□□ -0.9
NEK9-206ENST00000555537 GLT8D2Q9H1C3 349 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 MINDY3Q9H8M7 445 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 IFT122Q9HBG6 1241 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.41□□□□□ -0.9
NEK9-206ENST00000555537 KANSL3Q9P2N6 904 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 CDV3Q9UKY7 258 aaKnown RBP9.41□□□□□ -0.9
NEK9-206ENST00000555537 NAP1L2Q9ULW6 460 aaPredicted RBP9.41□□□□□ -0.9
NEK9-206ENST00000555537 USP18Q9UMW8 372 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 WDR81Q562E7 1941 aa9.41□□□□□ -0.9
NEK9-206ENST00000555537 CACNA1IQ9P0X4 2223 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 GOLGA8AA7E2F4 631 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 GOLGA8BA8MQT2 603 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 hCG_1984214I3L0E3 225 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 GAS7O60861 476 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 MAFO75444 373 aaPredicted RBP9.4□□□□□ -0.9
NEK9-206ENST00000555537 EFEMP2O95967 443 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 FSHRP23945 695 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 HOXA11P31270 313 aaPredicted RBP9.4□□□□□ -0.9
NEK9-206ENST00000555537 CIITAP33076 1130 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 EXOSC10Q01780 885 aaKnown RBP9.4□□□□□ -0.9
NEK9-206ENST00000555537 DSG1Q02413 1049 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 LPAL2Q16609 132 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 XKR3Q5GH77 459 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 LRCH2Q5VUJ6 765 aa9.4□□□□□ -0.9
NEK9-206ENST00000555537 PLA2G4FQ68DD2 849 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms