RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 RGS3P49796 1198 aa5.02□□□□□ -1.61
SRP54-207ENST00000555535 KIAA1614Q5VZ46 1190 aa5.02□□□□□ -1.61
SRP54-207ENST00000555535 CPEB3Q8NE35 698 aaKnown RBP5.02□□□□□ -1.61
SRP54-207ENST00000555535 MAML3Q96JK9 1138 aa5.02□□□□□ -1.61
SRP54-207ENST00000555535 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.02□□□□□ -1.61
SRP54-207ENST00000555535 CELF4Q9BZC1 486 aaKnown RBP5.02□□□□□ -1.61
SRP54-207ENST00000555535 PCDHA9Q9Y5H5 950 aa5.02□□□□□ -1.61
SRP54-207ENST00000555535 MAST3O60307 1309 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 FSBPO95073 299 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 RASGRP1O95267 797 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 MATN4O95460 622 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 ERCC5P28715 1186 aaPredicted RBP5.01□□□□□ -1.61
SRP54-207ENST00000555535 MPLP40238 635 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 GNL2Q13823 731 aaKnown RBP5.01□□□□□ -1.61
SRP54-207ENST00000555535 FAM214AQ32MH5 1076 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 CELF2-AS1Q8N7Q2 184 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 UIMC1Q96RL1 719 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 CPEB1Q9BZB8 566 aaKnown RBP5.01□□□□□ -1.61
SRP54-207ENST00000555535 ACSS2Q9NR19 701 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 DNAI1Q9UI46 699 aa5.01□□□□□ -1.61
SRP54-207ENST00000555535 TRBV23-1A0A0A0MS06 115 aa5□□□□□ -1.61
SRP54-207ENST00000555535 NPTXRO95502 500 aa5□□□□□ -1.61
SRP54-207ENST00000555535 CRTAMO95727 393 aa5□□□□□ -1.61
SRP54-207ENST00000555535 CBSLP0DN79 551 aa5□□□□□ -1.61
SRP54-207ENST00000555535 EGR2P11161 476 aaPredicted RBP5□□□□□ -1.61
SRP54-207ENST00000555535 CBSP35520 551 aa5□□□□□ -1.61
SRP54-207ENST00000555535 SRSF4Q08170 494 aaKnown RBP5□□□□□ -1.61
SRP54-207ENST00000555535 TTC38Q5R3I4 469 aa5□□□□□ -1.61
SRP54-207ENST00000555535 LCE1EQ5T753 118 aa5□□□□□ -1.61
SRP54-207ENST00000555535 MCF2L2Q86YR7 1114 aa5□□□□□ -1.61
SRP54-207ENST00000555535 ZNF778Q96MU6 729 aa5□□□□□ -1.61
SRP54-207ENST00000555535 SPATA9Q9BWV2 254 aa5□□□□□ -1.61
SRP54-207ENST00000555535 ENKD1Q9H0I2 346 aa5□□□□□ -1.61
SRP54-207ENST00000555535 PRR5-ARHGAP8B1AHC4 643 aa4.99□□□□□ -1.61
SRP54-207ENST00000555535 C6orf222P0C671 652 aaPredicted RBP4.99□□□□□ -1.61
SRP54-207ENST00000555535 HNRNPLP14866 589 aaKnown RBP eCLIP4.99□□□□□ -1.61
SRP54-207ENST00000555535 ZSCAN20P17040 1043 aaPredicted RBP4.99□□□□□ -1.61
SRP54-207ENST00000555535 PLA2G5P39877 138 aa4.99□□□□□ -1.61
SRP54-207ENST00000555535 PIK3R6Q5UE93 754 aa4.99□□□□□ -1.61
SRP54-207ENST00000555535 NME9Q86XW9 330 aa4.99□□□□□ -1.61
SRP54-207ENST00000555535 HNRNPLLQ8WVV9 542 aaKnown RBP4.99□□□□□ -1.61
SRP54-207ENST00000555535 WASF1Q92558 559 aa4.99□□□□□ -1.61
SRP54-207ENST00000555535 RNF181Q9P0P0 153 aa4.99□□□□□ -1.61
SRP54-207ENST00000555535 ZNF70Q9UC06 446 aaPredicted RBP4.99□□□□□ -1.61
SRP54-207ENST00000555535 UBA6A0AVT1 1052 aaPredicted RBP4.98□□□□□ -1.61
SRP54-207ENST00000555535 MGAT1P26572 445 aa4.98□□□□□ -1.61
SRP54-207ENST00000555535 CACNA2D1P54289 1103 aa4.98□□□□□ -1.61
SRP54-207ENST00000555535 IRF9Q00978 393 aa4.98□□□□□ -1.61
SRP54-207ENST00000555535 MRPL49Q13405 166 aaKnown RBP4.98□□□□□ -1.61
SRP54-207ENST00000555535 ZNF169Q14929 603 aaPredicted RBP4.98□□□□□ -1.61
SRP54-207ENST00000555535 ZNF425Q6IV72 752 aa4.98□□□□□ -1.61
SRP54-207ENST00000555535 DRICH1Q6PGQ1 229 aaPredicted RBP4.98□□□□□ -1.61
SRP54-207ENST00000555535 OR5M3Q8NGP4 307 aa4.98□□□□□ -1.61
SRP54-207ENST00000555535 TINF2Q9BSI4 451 aa4.98□□□□□ -1.61
SRP54-207ENST00000555535 BOCQ9BWV1 1114 aa4.98□□□□□ -1.61
SRP54-207ENST00000555535 EFCAB14O75071 495 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 HSP90B1P14625 803 aaKnown RBP4.97□□□□□ -1.61
SRP54-207ENST00000555535 FDXRP22570 491 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 RARRES1P49788 294 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 RNASE9P60153 205 aaKnown RBP4.97□□□□□ -1.61
SRP54-207ENST00000555535 TP53BP2Q13625 1128 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 FSTL4Q6MZW2 842 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 OVCH1Q7RTY7 1134 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 ARHGEF25Q86VW2 580 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 C2orf69Q8N8R5 385 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 IL17RAQ96F46 866 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 LSM14BQ9BX40 385 aaKnown RBP4.97□□□□□ -1.61
SRP54-207ENST00000555535 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
SRP54-207ENST00000555535 UNC119BA6NIH7 251 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 KLF4O43474 513 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 SIM1P81133 766 aaPredicted RBP4.96□□□□□ -1.62
SRP54-207ENST00000555535 NHLH2Q02577 135 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 ARID5AQ03989 594 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 ARHGAP44Q17R89 818 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 PRAMEF9Q5VWM5 478 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 ANKS3Q6ZW76 656 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 PTF1AQ7RTS3 328 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 SLC44A3Q8N4M1 653 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 ASB10Q8WXI3 467 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 USP36Q9P275 1121 aaKnown RBP4.96□□□□□ -1.62
SRP54-207ENST00000555535 COQ6Q9Y2Z9 468 aa4.96□□□□□ -1.62
SRP54-207ENST00000555535 LEFTY2O00292 366 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 C1QL1O75973 258 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 ALDH1A2O94788 518 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 SPDEFO95238 335 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 FOSP01100 380 aaPredicted RBP4.95□□□□□ -1.62
SRP54-207ENST00000555535 ITGAMP11215 1152 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 GZMKP49863 264 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 PTTG1IPP53801 180 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 GPRIN1Q7Z2K8 1008 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 UNC5BQ8IZJ1 945 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 SH2D3CQ8N5H7 860 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 PITHD1Q9GZP4 211 aaPredicted RBP4.95□□□□□ -1.62
SRP54-207ENST00000555535 SLC17A6Q9P2U8 582 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 FPGT-TNNI3KV9GXZ4 949 aa4.95□□□□□ -1.62
SRP54-207ENST00000555535 A0A0A6YYJ9 748 aa4.94□□□□□ -1.62
SRP54-207ENST00000555535 MARCH11A6NNE9 402 aa4.94□□□□□ -1.62
SRP54-207ENST00000555535 CYP17A1P05093 508 aa4.94□□□□□ -1.62
SRP54-207ENST00000555535 RBP3P10745 1247 aa4.94□□□□□ -1.62
SRP54-207ENST00000555535 TCF3P15923 654 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms