RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 HIP1RO75146 1068 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 OFD1O75665 1012 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 BMP15O95972 392 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 SLC12A3P55017 1021 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 RAD51AP2Q09MP3 1159 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 KARSQ15046 597 aaKnown RBP15.13■□□□□ 0.01
SNX6-203ENST00000555416 TCEAL5Q5H9L2 206 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 SPOUT1Q5T280 376 aaKnown RBP15.13■□□□□ 0.01
SNX6-203ENST00000555416 P2RX5Q93086 422 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 EPSTI1Q96J88 318 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 CLIC6Q96NY7 704 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 CSRNP2Q9H175 543 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 FZD8Q9H461 694 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 BLOC1S4Q9NUP1 217 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 INPP5FQ9Y2H2 1132 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 IPPQ9Y573 584 aa15.13■□□□□ 0.01
SNX6-203ENST00000555416 FGF18O76093 207 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 SSBP05455 408 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNX6-203ENST00000555416 PLA2G4BP0C869 781 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 LIG1P18858 919 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 GTF2F1P35269 517 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNX6-203ENST00000555416 NAMPTP43490 491 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 RAB27AP51159 221 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 PTPROQ16827 1216 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 ARSHQ5FYA8 562 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 NOMO2Q5JPE7 1267 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 KCNT2Q6UVM3 1135 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 ABI1Q8IZP0 508 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 LRRC43Q8N309 656 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 SYT2Q8N9I0 419 aaPredicted RBP15.12■□□□□ 0.01
SNX6-203ENST00000555416 POF1BQ8WVV4 589 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 KIFAP3Q92845 792 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 AK8Q96MA6 479 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 NXF3Q9H4D5 531 aaKnown RBP15.12■□□□□ 0.01
SNX6-203ENST00000555416 THEGQ9P2T0 379 aa15.12■□□□□ 0.01
SNX6-203ENST00000555416 A0A1B0GUA9 196 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 NT5C1B-RDH14C9J2C7 533 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 NPTXRO95502 500 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 PRKCBP05771 671 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 SKIP12755 728 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 LAG3P18627 525 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 PLCG1P19174 1290 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 NCLP19338 710 aaKnown RBP15.11■□□□□ 0.01
SNX6-203ENST00000555416 AXLP30530 894 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 LONP1P36776 959 aaKnown RBP15.11■□□□□ 0.01
SNX6-203ENST00000555416 NPTX2P47972 431 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 PEX3P56589 373 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 FAM187BQ17R55 369 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 NAALADL2Q58DX5 795 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 NT5DC1Q5TFE4 455 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 EEF1DP3Q658K8 133 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 NOTUMQ6P988 496 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 TAS1R3Q7RTX0 852 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 ADGRD2Q7Z7M1 963 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 TMEM173Q86WV6 379 aaPredicted RBP15.11■□□□□ 0.01
SNX6-203ENST00000555416 ZNF280BQ86YH2 543 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 DEPTORQ8TB45 409 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 BCL7CQ8WUZ0 217 aaPredicted RBP15.11■□□□□ 0.01
SNX6-203ENST00000555416 ZSCAN16Q9H4T2 348 aaPredicted RBP15.11■□□□□ 0.01
SNX6-203ENST00000555416 PDZD7Q9H5P4 517 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 NRDE2Q9H7Z3 1164 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 TBC1D13Q9NVG8 400 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 MIOSQ9NXC5 875 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 TFIP11Q9UBB9 837 aaKnown RBP15.11■□□□□ 0.01
SNX6-203ENST00000555416 DNAJB4Q9UDY4 337 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 PCDHB12Q9Y5F1 795 aa15.11■□□□□ 0.01
SNX6-203ENST00000555416 SRPRBQ9Y5M8 271 aaKnown RBP15.11■□□□□ 0.01
SNX6-203ENST00000555416 DDHD2O94830 711 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 GUCY2CP25092 1073 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 UBA7P41226 1012 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 KCNQ1P51787 676 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 BCAR1P56945 870 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 ERVFC1P60507 584 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 DHX8Q14562 1220 aaKnown RBP15.1■□□□□ 0.01
SNX6-203ENST00000555416 MCM6Q14566 821 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 SLC39A14Q15043 492 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 PCBP1Q15365 356 aaKnown RBP eCLIP15.1■□□□□ 0.012e-8■■■■■ 73.5
SNX6-203ENST00000555416 FOXD4L6Q3SYB3 417 aaPredicted RBP15.1■□□□□ 0.01
SNX6-203ENST00000555416 TIGD5Q53EQ6 642 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 GLB1LQ6UWU2 654 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 FOXD4L3Q6VB84 417 aaPredicted RBP15.1■□□□□ 0.01
SNX6-203ENST00000555416 ZBTB8OSQ8IWT0 167 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 THNSL1Q8IYQ7 743 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 SYMPKQ92797 1274 aaKnown RBP15.1■□□□□ 0.01
SNX6-203ENST00000555416 CCDC51Q96ER9 411 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 CDK5RAP3Q96JB5 506 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 ZNF558Q96NG5 402 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 APOL6Q9BWW8 343 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 NT5C3AQ9H0P0 336 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 LMAN2LQ9H0V9 348 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 CXCL16Q9H2A7 254 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 NSUN3Q9H649 340 aaKnown RBP15.1■□□□□ 0.01
SNX6-203ENST00000555416 RSAD1Q9HA92 442 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 PRMT7Q9NVM4 692 aaPredicted RBP15.1■□□□□ 0.01
SNX6-203ENST00000555416 CNTNAP2Q9UHC6 1331 aa15.1■□□□□ 0.01
SNX6-203ENST00000555416 MYH15Q9Y2K3 1946 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 ACKR2O00590 384 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 SLC16A4O15374 487 aa15.09■□□□□ 0.01
SNX6-203ENST00000555416 HSP90AA1P07900 732 aaKnown RBP15.09■□□□□ 0.01
SNX6-203ENST00000555416 ZSCAN22P10073 491 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms