RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 MAPK7Q13164 816 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 GIT2Q14161 759 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 GPNMBQ14956 572 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 STX1AQ16623 288 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 MAPK6Q16659 721 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 TMEM132AQ24JP5 1023 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 DYMQ7RTS9 669 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 FAM228AQ86W67 206 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 DHX40Q8IX18 779 aaKnown RBP12.01□□□□□ -0.49
SHMT2-218ENST00000555213 CCDC65Q8IXS2 484 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 DAW1Q8N136 415 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 MYCT1Q8N699 235 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 SPIRE2Q8WWL2 714 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 BSNDQ8WZ55 320 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 SMARCE1Q969G3 411 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 GSDMAQ96QA5 445 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 TRIM9Q9C026 710 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 C1orf112Q9NSG2 853 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 PRMT7Q9NVM4 692 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-218ENST00000555213 ANO10Q9NW15 660 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 SEL1LQ9UBV2 794 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 ST3GAL5Q9UNP4 418 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 PIN4Q9Y237 131 aaKnown RBP12.01□□□□□ -0.49
SHMT2-218ENST00000555213 SLC4A7Q9Y6M7 1214 aa12.01□□□□□ -0.49
SHMT2-218ENST00000555213 EVPLQ92817 2033 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 PPP1R3GB7ZBB8 358 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 K7ENM7 598 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 RPN1P04843 607 aaKnown RBP12□□□□□ -0.49
SHMT2-218ENST00000555213 AXLP30530 894 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 ZNF131P52739 623 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 MBTD1Q05BQ5 628 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 EHHADHQ08426 723 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 STRN3Q13033 797 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 NCAPHQ15003 741 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 C16orf59Q7L2K0 433 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 APBB1IPQ7Z5R6 666 aaPredicted RBP12□□□□□ -0.49
SHMT2-218ENST00000555213 FAM178BQ8IXR5 827 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 TRIML1Q8N9V2 468 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 CCDC47Q96A33 483 aaKnown RBP12□□□□□ -0.49
SHMT2-218ENST00000555213 CCDC51Q96ER9 411 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 PRIMPOLQ96LW4 560 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 SLC9A7Q96T83 725 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 KIFC3Q9BVG8 833 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 CHST12Q9NRB3 414 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 AGPAT5Q9NUQ2 364 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 SIP14410 1827 aa12□□□□□ -0.49
SHMT2-218ENST00000555213 K7ERI5 159 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 SLC16A4O15374 487 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 CSDE1O75534 798 aaKnown RBP11.99□□□□□ -0.49
SHMT2-218ENST00000555213 SMC2O95347 1197 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 PRKCBP05771 671 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 ZNF165P49910 485 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 WDR5P61964 334 aaKnown RBP11.99□□□□□ -0.49
SHMT2-218ENST00000555213 PRPF4BQ13523 1007 aaKnown RBP11.99□□□□□ -0.49
SHMT2-218ENST00000555213 KCNB1Q14721 858 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 SHHQ15465 462 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 UVSSAQ2YD98 709 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 C9orf50Q5SZB4 431 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 TWF2Q6IBS0 349 aaKnown RBP11.99□□□□□ -0.49
SHMT2-218ENST00000555213 NOTUMQ6P988 496 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 STXBP4Q6ZWJ1 553 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 LUZP1Q86V48 1076 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 FAM200AQ8TCP9 573 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 BPIFA3Q9BQP9 254 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 HSD3B7Q9H2F3 369 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-218ENST00000555213 POLD4Q9HCU8 107 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 PANK4Q9NVE7 773 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 ARHGAP28Q9P2N2 729 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 CNTNAP2Q9UHC6 1331 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 SCN5AQ14524 2016 aa11.99□□□□□ -0.49
SHMT2-218ENST00000555213 SFI1A8K8P3 1242 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 TSPAN1O60635 241 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 RHOBTB3O94955 611 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 CAVIN2O95810 425 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 MAPTP10636 758 aaKnown RBP11.98□□□□□ -0.49
SHMT2-218ENST00000555213 SKIP12755 728 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
SHMT2-218ENST00000555213 FGFR4P22455 802 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 DEKP35659 375 aaKnown RBP11.98□□□□□ -0.49
SHMT2-218ENST00000555213 RAB27AP51159 221 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 ALCAMQ13740 583 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 FAM187BQ17R55 369 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 HERC4Q5GLZ8 1057 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-218ENST00000555213 UNC13DQ70J99 1090 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 SFR1Q86XK3 245 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 MLKLQ8NB16 471 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 PHOSPHO2Q8TCD6 241 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 VWCEQ96DN2 955 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 ADAM2Q99965 735 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 NTPCRQ9BSD7 190 aaKnown RBP11.98□□□□□ -0.49
SHMT2-218ENST00000555213 MRPL4Q9BYD3 311 aaKnown RBP11.98□□□□□ -0.49
SHMT2-218ENST00000555213 OSBPL7Q9BZF2 842 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 CCDC113Q9H0I3 377 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 PRO3102Q9H379 93 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 TMX1Q9H3N1 280 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 TMEM134Q9H6X4 195 aa11.98□□□□□ -0.49
SHMT2-218ENST00000555213 MINDY3Q9H8M7 445 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms