RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 HIP1RO75146 1068 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 EOMESO95936 686 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 SARSP49591 514 aaKnown RBP11.7□□□□□ -0.54
TMEM260-206ENST00000555046 MAPK6Q16659 721 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 AXDND1Q5T1B0 1012 aaPredicted RBP11.7□□□□□ -0.54
TMEM260-206ENST00000555046 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 GPBP1Q86WP2 473 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 KSR1Q8IVT5 923 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 CNNM3Q8NE01 707 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 TMEM40Q8WWA1 233 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 TIFAQ96CG3 184 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 PRIMPOLQ96LW4 560 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 TRAIPQ9BWF2 469 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 PANK2Q9BZ23 570 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 ELAC1Q9H777 363 aaKnown RBP11.7□□□□□ -0.54
TMEM260-206ENST00000555046 SLC28A3Q9HAS3 691 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 PRMT7Q9NVM4 692 aaPredicted RBP11.7□□□□□ -0.54
TMEM260-206ENST00000555046 USP25Q9UHP3 1055 aa11.7□□□□□ -0.54
TMEM260-206ENST00000555046 A0A0U1RQF3 1178 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 A0A1W2PQ27 194 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 A0A1W2PQ64 194 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 A0A1W2PQD8 194 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 TBCAO75347 108 aaKnown RBP11.69□□□□□ -0.54
TMEM260-206ENST00000555046 GJB5O95377 273 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 PLS3P13797 630 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 RAB27AP51159 221 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 FAM189BP81408 668 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 CAPSQ13938 189 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 DHX8Q14562 1220 aaKnown RBP11.69□□□□□ -0.54
TMEM260-206ENST00000555046 MCM6Q14566 821 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 FAM187BQ17R55 369 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 RESP18Q5W5W9 173 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 NOTUMQ6P988 496 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.69□□□□□ -0.54
TMEM260-206ENST00000555046 USP49Q70CQ1 688 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 KCNK18Q7Z418 384 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 NPAS4Q8IUM7 802 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 HACE1Q8IYU2 909 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 CEP57L1Q8IYX8 460 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 ASAP3Q8TDY4 903 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 SPIRE2Q8WWL2 714 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 PGBD4Q96DM1 585 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 ZNF668Q96K58 619 aaPredicted RBP11.69□□□□□ -0.54
TMEM260-206ENST00000555046 IPO9Q96P70 1041 aaKnown RBP11.69□□□□□ -0.54
TMEM260-206ENST00000555046 YME1L1Q96TA2 773 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 TMEM134Q9H6X4 195 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 GPRC5CQ9NQ84 441 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 KMT5AQ9NQR1 393 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 KCNH3Q9ULD8 1083 aa11.69□□□□□ -0.54
TMEM260-206ENST00000555046 RIF1Q5UIP0 2472 aaKnown RBP11.68□□□□□ -0.54
TMEM260-206ENST00000555046 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-206ENST00000555046 CARNS1A5YM72 827 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 PI4K2BG5E9Z4 385 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 KRT37O76014 449 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 FAM13AO94988 1023 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 UPP2O95045 317 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 PEX3P56589 373 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 STRN3Q13033 797 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 CDCA2Q69YH5 1023 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-206ENST00000555046 TWF2Q6IBS0 349 aaKnown RBP11.68□□□□□ -0.54
TMEM260-206ENST00000555046 SHC4Q6S5L8 630 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 RTN4RL1Q86UN2 441 aaPredicted RBP11.68□□□□□ -0.54
TMEM260-206ENST00000555046 MYCT1Q8N699 235 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 PDILTQ8N807 584 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 RUSC1Q9BVN2 902 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 OSBPL7Q9BZF2 842 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 TNMDQ9H2S6 317 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 TMX1Q9H3N1 280 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 FZD8Q9H461 694 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 UBN1Q9NPG3 1134 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 BLOC1S4Q9NUP1 217 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 AGPAT5Q9NUQ2 364 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 TMEM161AQ9NX61 479 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 SEL1LQ9UBV2 794 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 PIN4Q9Y237 131 aaKnown RBP11.68□□□□□ -0.54
TMEM260-206ENST00000555046 MYH9P35579 1960 aaKnown RBP11.68□□□□□ -0.54
TMEM260-206ENST00000555046 DOCK5Q9H7D0 1870 aa11.68□□□□□ -0.54
TMEM260-206ENST00000555046 C9IYK1 514 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 ACKR2O00590 384 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 POLR2DO15514 142 aaKnown RBP11.67□□□□□ -0.54
TMEM260-206ENST00000555046 ZNF623O75123 536 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
TMEM260-206ENST00000555046 MYL1P05976 194 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 GAP43P17677 238 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 NPTX2P47972 431 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 PRPF4BQ13523 1007 aaKnown RBP11.67□□□□□ -0.54
TMEM260-206ENST00000555046 GIT2Q14161 759 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 DSC3Q14574 896 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 ARSHQ5FYA8 562 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 KANK3Q6NY19 840 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 ABI1Q8IZP0 508 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 DDX12PQ92771 950 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 DHX58Q96C10 678 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 ADPGKQ9BRR6 497 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 PBX4Q9BYU1 374 aa11.67□□□□□ -0.54
TMEM260-206ENST00000555046 TRIM6Q9C030 488 aaPredicted RBP11.67□□□□□ -0.54
TMEM260-206ENST00000555046 ZHX3Q9H4I2 956 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms