RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 CPB2Q96IY4 423 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 PRIMPOLQ96LW4 560 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 CASD1Q96PB1 797 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 STK17AQ9UEE5 414 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 KCNG1Q9UIX4 513 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 PCDHA7Q9UN72 937 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 MRPL42Q9Y6G3 142 aaKnown RBP14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 ARID2Q68CP9 1835 aa14.26□□□□□ -0.13
MTHFD1-209ENST00000554768 CCDC169A6NNP5 214 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 TBKBP1A7MCY6 615 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 HOXA2O43364 376 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 LPXNO60711 386 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 EDN1P05305 212 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 PLS3P13797 630 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 POU3F3P20264 500 aaPredicted RBP14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 BMPR1AP36894 532 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 ME1P48163 572 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 RAB27AP51159 221 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 GIT2Q14161 759 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 MAPK6Q16659 721 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 PAN2Q504Q3 1202 aaKnown RBP14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 CLLU1OSQ5K130 101 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 LPPQ93052 612 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 SAMD11Q96NU1 681 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 REEP2Q9BRK0 252 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 TMEM117Q9H0C3 514 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 ODF2LQ9ULJ1 636 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 USP20Q9Y2K6 914 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 RBM19Q9Y4C8 960 aaKnown RBP14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 ATP6V1DQ9Y5K8 247 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 COL4A6Q14031 1691 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 LOXHD1Q8IVV2 1947 aa14.25□□□□□ -0.13
MTHFD1-209ENST00000554768 EYSQ5T1H1 3165 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 CNTNAP2Q9UHC6 1331 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 MEIS3P2A8K0S8 358 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 K7ERI5 159 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 PRKCBP05771 671 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 FOSL2P15408 326 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 ZNF131P52739 623 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 KRT85P78386 507 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 NUCB2P80303 420 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 DMP1Q13316 513 aaPredicted RBP14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 PRPF4BQ13523 1007 aaKnown RBP14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 E2F4Q16254 413 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 LONRF3Q496Y0 759 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 NT5DC1Q5TFE4 455 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 LRRC55Q6ZSA7 311 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 PDILTQ8N807 584 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 SMG8Q8ND04 991 aaKnown RBP14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 LEO1Q8WVC0 666 aaPredicted RBP14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 PGBD4Q96DM1 585 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 GAS2L1Q99501 681 aaPredicted RBP14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 EIF2AQ9BY44 585 aaKnown RBP14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 TMEM134Q9H6X4 195 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 KMT5AQ9NQR1 393 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 TYW1Q9NV66 732 aaKnown RBP14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 ARHGAP28Q9P2N2 729 aa14.24□□□□□ -0.13
MTHFD1-209ENST00000554768 MYMKA6NI61 221 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 C5orf67F2Z3F1 127 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 SLC16A4O15374 487 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 OFD1O75665 1012 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 KRT18P05783 430 aaKnown RBP14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 RB1P06400 928 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 LIG1P18858 919 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 NCLP19338 710 aaKnown RBP14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 STAT6P42226 847 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 SMTNP53814 917 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 RESP18Q5W5W9 173 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 SLC27A1Q6PCB7 646 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 AGMOQ6ZNB7 445 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 TAS1R3Q7RTX0 852 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 CDR2LQ86X02 465 aaPredicted RBP14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 TMEM161BQ8NDZ6 487 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 CNNM3Q8NE01 707 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 FBXO22Q8NEZ5 403 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 HELQQ8TDG4 1101 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 PDZD7Q9H5P4 517 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 LARSQ9P2J5 1176 aaKnown RBP14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 RWDD3Q9Y3V2 267 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 IPPQ9Y573 584 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 GBF1Q92538 1859 aa14.23□□□□□ -0.13
MTHFD1-209ENST00000554768 H3BNC9 293 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 MAPTP10636 758 aaKnown RBP14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 IGFBP4P22692 258 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 CTNNB1P35222 781 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 GLB1LQ6UWU2 654 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 ABI1Q8IZP0 508 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 MYCT1Q8N699 235 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 GDPD5Q8WTR4 605 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 RSPH1Q8WYR4 309 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 KCNN1Q92952 543 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 DNAJC19Q96DA6 116 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 SCAND2PQ9GZW5 306 aaPredicted RBP14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 CWH43Q9H720 699 aa14.22□□□□□ -0.13
MTHFD1-209ENST00000554768 PARVGQ9HBI0 331 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms