RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
VPS33B-204ENST00000554660 DBR1Q9UK59 544 aaKnown RBP12.76□□□□□ -0.37
VPS33B-204ENST00000554660 CEP131Q9UPN4 1083 aa12.76□□□□□ -0.37
VPS33B-204ENST00000554660 GOLGA8AA7E2F4 631 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 GOLGA8BA8MQT2 603 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 hCG_1984214I3L0E3 225 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 ZBTB43O43298 467 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 ZC3H11AO75152 810 aaKnown RBP eCLIP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 CSDE1O75534 798 aaKnown RBP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 YEATS4O95619 227 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 PSAPP07602 524 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 DARSP14868 501 aaKnown RBP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 EIF4BP23588 611 aaKnown RBP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 GPC3P51654 580 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 SETQ01105 290 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 STX1AQ16623 288 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 UGCGQ16739 394 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 LONRF3Q496Y0 759 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 TMC5Q6UXY8 1006 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 BRAPQ7Z569 592 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 ZNF598Q86UK7 904 aaKnown RBP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 SMAP1Q8IYB5 467 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 VPS52Q8N1B4 723 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 ZNF713Q8N859 430 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 BCL7CQ8WUZ0 217 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 TMEM169Q96HH4 297 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 MRFAP1L1Q96HT8 127 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 MRPL9Q9BYD2 267 aaKnown RBP12.75□□□□□ -0.37
VPS33B-204ENST00000554660 CBX8Q9HC52 389 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 SAMM50Q9Y512 469 aa12.75□□□□□ -0.37
VPS33B-204ENST00000554660 A0A0U1RQF3 1178 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 MAGEB2O15479 319 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 ZNF862O60290 1169 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 JAK2O60674 1132 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 CTDNEP1O95476 244 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 CXCL14O95715 111 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 OATP04181 439 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 TMOD1P28289 359 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
VPS33B-204ENST00000554660 CDC27P30260 824 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 ALDH7A1P49419 539 aaKnown RBP12.74□□□□□ -0.37
VPS33B-204ENST00000554660 ZNF165P49910 485 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 ZNF75DP51815 510 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 FOXK2Q01167 660 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 PRKCEQ02156 737 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 FAM160A1Q05DH4 1040 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 SYCP1Q15431 976 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 ANO6Q4KMQ2 910 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 PRR16Q569H4 304 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 TEX2Q8IWB9 1127 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 ZDHHC14Q8IZN3 488 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 LPPQ93052 612 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 NKD2Q969F2 451 aaPredicted RBP12.74□□□□□ -0.37
VPS33B-204ENST00000554660 FAM167AQ96KS9 214 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 TBC1D22BQ9NU19 505 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 DZANK1Q9NVP4 752 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 ANO10Q9NW15 660 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 PCDHA10Q9Y5I2 948 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 SPTBN4Q9H254 2564 aa12.74□□□□□ -0.37
VPS33B-204ENST00000554660 MYH9P35579 1960 aaKnown RBP12.73□□□□□ -0.37
VPS33B-204ENST00000554660 KLF18A0A0U1RQI7 1052 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 CHMP2AO43633 222 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 EOMESO95936 686 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 CYP3A4P08684 503 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 STK3Q13188 491 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 DRP2Q13474 957 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 ATAT1Q5SQI0 421 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 CABP7Q86V35 215 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 ADSSL1Q8N142 457 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 ENGASEQ8NFI3 743 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 KCNG4Q8TDN1 519 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 BPIFA3Q9BQP9 254 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 GLT8D2Q9H1C3 349 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 TTC12Q9H892 705 aaPredicted RBP12.73□□□□□ -0.37
VPS33B-204ENST00000554660 KCND1Q9NSA2 647 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 FAM217BQ9NTX9 383 aaPredicted RBP12.73□□□□□ -0.37
VPS33B-204ENST00000554660 INPP5FQ9Y2H2 1132 aa12.73□□□□□ -0.37
VPS33B-204ENST00000554660 TMEM150BA6NC51 233 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 MEIS3P2A8K0S8 358 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 WDR64B1ANS9 1081 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 AP5Z1O43299 807 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 PI15O43692 258 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 KINO60870 393 aaKnown RBP12.72□□□□□ -0.37
VPS33B-204ENST00000554660 NR1I2O75469 434 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 CTSAP10619 480 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 NPR3P17342 541 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 CLCN5P51795 746 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 BMS1Q14692 1282 aaKnown RBP12.72□□□□□ -0.37
VPS33B-204ENST00000554660 IQCB1Q15051 598 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 PFKFB3Q16875 520 aaPredicted RBP12.72□□□□□ -0.37
VPS33B-204ENST00000554660 DNTTIP2Q5QJE6 756 aaKnown RBP12.72□□□□□ -0.37
VPS33B-204ENST00000554660 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 REXO1Q8N1G1 1221 aaKnown RBP12.72□□□□□ -0.37
VPS33B-204ENST00000554660 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 SLC22A17Q8WUG5 538 aa12.72□□□□□ -0.37
VPS33B-204ENST00000554660 LENG9Q96B70 501 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms