RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 GBP3Q9H0R5 595 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 CWH43Q9H720 699 aa11.8□□□□□ -0.52
SHMT2-213ENST00000554600 UBE2ZQ9H832 354 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-213ENST00000554600 BDP1A6H8Y1 2624 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 MEIS3P2A8K0S8 358 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 B4GALT5O43286 388 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 ZNF623O75123 536 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 ZC3H11AO75152 810 aaKnown RBP eCLIP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 ITGA4P13612 1032 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 ARF4P18085 180 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 KCNA5P22460 613 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 DNAJB1P25685 340 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 CA8P35219 290 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 PPM1AP35813 382 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 UBA7P41226 1012 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 ALDH7A1P49419 539 aaKnown RBP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 NOMO2Q5JPE7 1267 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 UBXN11Q5T124 520 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 LRRC55Q6ZSA7 311 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 CABP7Q86V35 215 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 CDR2LQ86X02 465 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 IFNLR1Q8IU57 520 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 BSNDQ8WZ55 320 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 KIFAP3Q92845 792 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 SNX21Q969T3 373 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 CCDC51Q96ER9 411 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 CALML4Q96GE6 196 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 MMTAG2Q9BU76 263 aaKnown RBP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 TRAIPQ9BWF2 469 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 EIF2AQ9BY44 585 aaKnown RBP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 NT5C3AQ9H0P0 336 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 CSRNP2Q9H175 543 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 C2orf40Q9H1Z8 148 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 RSAD1Q9HA92 442 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 PRMT7Q9NVM4 692 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 CLDND1Q9NY35 253 aa11.79□□□□□ -0.52
SHMT2-213ENST00000554600 PUF60Q9UHX1 559 aaKnown RBP11.79□□□□□ -0.52
SHMT2-213ENST00000554600 CCDC169A6NNP5 214 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 NT5C1B-RDH14C9J2C7 533 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 STX6O43752 255 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 NPTXRO95502 500 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 PRKCBP05771 671 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 PLA2G5P39877 138 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 NAMPTP43490 491 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 KCNQ1P51787 676 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 KRT17Q04695 432 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 RAD51AP2Q09MP3 1159 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 RESTQ13127 1097 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 DHX8Q14562 1220 aaKnown RBP11.78□□□□□ -0.52
SHMT2-213ENST00000554600 MAPK6Q16659 721 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 FOXD4L5Q5VV16 416 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-213ENST00000554600 FAM173BQ6P4H8 233 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 AGMOQ6ZNB7 445 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 KCNK18Q7Z418 384 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 RBM23Q86U06 439 aaKnown RBP11.78□□□□□ -0.52
SHMT2-213ENST00000554600 HACE1Q8IYU2 909 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 CNNM3Q8NE01 707 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 FOXD4L4Q8WXT5 416 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-213ENST00000554600 AK8Q96MA6 479 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 FAM193BQ96PV7 902 aaPredicted RBP11.78□□□□□ -0.52
SHMT2-213ENST00000554600 KIFC3Q9BVG8 833 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 RUSC1Q9BVN2 902 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 NFKBIZQ9BYH8 718 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 ENTPD7Q9NQZ7 604 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 TLR9Q9NR96 1032 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 TBC1D13Q9NVG8 400 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 SPG21Q9NZD8 308 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 IPPQ9Y573 584 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 PCDHGC5Q9Y5F6 944 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 CNTNAP2Q9UHC6 1331 aa11.78□□□□□ -0.52
SHMT2-213ENST00000554600 PDCD11Q14690 1871 aaKnown RBP11.78□□□□□ -0.52
SHMT2-213ENST00000554600 HIP1RO75146 1068 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 OFD1O75665 1012 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
SHMT2-213ENST00000554600 MARCKSP29966 332 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-213ENST00000554600 IRS1P35568 1242 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 PEX3P56589 373 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 BCAR1P56945 870 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 UBE3AQ05086 875 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 DMP1Q13316 513 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-213ENST00000554600 PRPF4BQ13523 1007 aaKnown RBP11.77□□□□□ -0.53
SHMT2-213ENST00000554600 AMHR2Q16671 573 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 PLPP4Q5VZY2 271 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 CDCA2Q69YH5 1023 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-213ENST00000554600 RINT1Q6NUQ1 792 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 SLC27A1Q6PCB7 646 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 MRPL10Q7Z7H8 261 aaKnown RBP11.77□□□□□ -0.53
SHMT2-213ENST00000554600 SMG8Q8ND04 991 aaKnown RBP11.77□□□□□ -0.53
SHMT2-213ENST00000554600 ADAMTS19Q8TE59 1207 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 RSPH1Q8WYR4 309 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 TMEM169Q96HH4 297 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 PRIMPOLQ96LW4 560 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 DRC1Q96MC2 740 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 PNMA5Q96PV4 448 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 PARP2Q9UGN5 583 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 MTMR6Q9Y217 621 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 USP20Q9Y2K6 914 aa11.77□□□□□ -0.53
SHMT2-213ENST00000554600 HES2Q9Y543 173 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms