RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 FOXP4Q8IVH2 680 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-228ENST00000554592 ST13P5Q8NFI4 369 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-228ENST00000554592 HAUS7Q99871 368 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 RNF32Q9H0A6 362 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 USP44Q9H0E7 712 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 PORCNQ9H237 461 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 PRR13Q9NZ81 148 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 PI4KBQ9UBF8 816 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 RAPGEFL1Q9UHV5 662 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 PFDN2Q9UHV9 154 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 TCFL5Q9UL49 500 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 RABGAP1Q9Y3P9 1069 aa5.95□□□□□ -1.46
ATXN3-228ENST00000554592 ARAP2Q8WZ64 1704 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 FITM1A5D6W6 292 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 CIAO1O76071 339 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 EPHX1P07099 455 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 HOXC6P09630 235 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 IL15P40933 162 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-228ENST00000554592 PHKA1P46020 1223 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 GSTO1P78417 241 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 MRPS5P82675 430 aaKnown RBP5.94□□□□□ -1.46
ATXN3-228ENST00000554592 MAP3K12Q12852 859 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 SLC10A6Q3KNW5 377 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 GJC2Q5T442 439 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-228ENST00000554592 ZPBP2Q6X784 338 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 CILP2Q8IUL8 1156 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 CCDC144CPQ8IYA2 1237 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 LILRA2Q8N149 483 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 USP38Q8NB14 1042 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 FAM84AQ96KN4 292 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 ASB2Q96Q27 587 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 PAGR1Q9BTK6 254 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 C1QTNF1Q9BXJ1 281 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 MKRN2Q9H000 416 aaKnown RBP5.94□□□□□ -1.46
ATXN3-228ENST00000554592 DHX36Q9H2U1 1008 aaKnown RBP5.94□□□□□ -1.46
ATXN3-228ENST00000554592 KCNK12Q9HB15 430 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 CHST7Q9NS84 486 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 GFOD1Q9NXC2 390 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 FLRT1Q9NZU1 646 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 ZMYM5Q9UJ78 669 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 ZNF451Q9Y4E5 1061 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 PCDHB12Q9Y5F1 795 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 MROH7-TTC4A0A0A0MT08 1334 aa5.94□□□□□ -1.46
ATXN3-228ENST00000554592 PDS5AQ29RF7 1337 aaKnown RBP5.94□□□□□ -1.46
ATXN3-228ENST00000554592 RFX7Q2KHR2 1363 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 ANKRD34BA5PLL1 514 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 TRIM43BA6NCK2 446 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 KBTBD13C9JR72 458 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 PSPNO60542 156 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 SYPP08247 313 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 CYP2C19P33261 490 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 PCBP3P57721 371 aaKnown RBP5.93□□□□□ -1.46
ATXN3-228ENST00000554592 MECOMQ03112 1051 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 TLE2Q04725 743 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 SNX17Q15036 470 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 ZNF124Q15973 351 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 TRIM60Q495X7 471 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 AKNAD1Q5T1N1 836 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 WDR78Q5VTH9 848 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 OXR1Q8N573 874 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 ZNF513Q8N8E2 541 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-228ENST00000554592 ANKS4BQ8N8V4 417 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 TRIM43Q96BQ3 446 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-228ENST00000554592 ZNF669Q96BR6 464 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-228ENST00000554592 KLHL25Q9H0H3 589 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 PDLIM7Q9NR12 457 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 UNC80Q8N2C7 3258 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 MYH3P11055 1940 aa5.93□□□□□ -1.46
ATXN3-228ENST00000554592 SPEF2Q9C093 1822 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 KIAA0355O15063 1070 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 SEPT4O43236 478 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 STRNO43815 780 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 CNMDO75829 334 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 ZNF205O95201 554 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 BAG3O95817 575 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 RPL10P27635 214 aaKnown RBP5.92□□□□□ -1.46
ATXN3-228ENST00000554592 ADORA1P30542 326 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 ADCYAP1R1P41586 468 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 ZNF143P52747 638 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-228ENST00000554592 EPHB4P54760 987 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 TIMM10P62072 90 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 JAG1P78504 1218 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 CHRNEQ04844 493 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 SSRP1Q08945 709 aaKnown RBP5.92□□□□□ -1.46
ATXN3-228ENST00000554592 DUSP4Q13115 394 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 GRB14Q14449 540 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 OLFML2BQ68BL8 750 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 HEATR6Q6AI08 1181 aaKnown RBP5.92□□□□□ -1.46
ATXN3-228ENST00000554592 MPZL3Q6UWV2 235 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 CATSPERGQ6ZRH7 1159 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 DPP9Q86TI2 863 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 SPPL2CQ8IUH8 684 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 TEX11Q8IYF3 940 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 TRPV1Q8NER1 839 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 BHLHE22Q8NFJ8 381 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-228ENST00000554592 NPLOC4Q8TAT6 608 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 PPM1EQ8WY54 764 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 NSUN4Q96CB9 384 aaKnown RBP5.92□□□□□ -1.46
ATXN3-228ENST00000554592 TIFAQ96CG3 184 aa5.92□□□□□ -1.46
ATXN3-228ENST00000554592 MAP6Q96JE9 813 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms