RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 BARX2Q9UMQ3 279 aaPredicted RBP12.38□□□□□ -0.43
ABCD4-221ENST00000554453 ARIH1Q9Y4X5 557 aaPredicted RBP12.38□□□□□ -0.43
ABCD4-221ENST00000554453 XIRP2A4UGR9 3374 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 A0A087WWV3 80 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 ALDH2P05091 517 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 HOXB8P17481 243 aaPredicted RBP12.37□□□□□ -0.43
ABCD4-221ENST00000554453 NCLP19338 710 aaKnown RBP12.37□□□□□ -0.43
ABCD4-221ENST00000554453 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
ABCD4-221ENST00000554453 RBM10P98175 930 aaKnown RBP12.37□□□□□ -0.43
ABCD4-221ENST00000554453 NCBP1Q09161 790 aaKnown RBP12.37□□□□□ -0.43
ABCD4-221ENST00000554453 SMC1AQ14683 1233 aaKnown RBP12.37□□□□□ -0.43
ABCD4-221ENST00000554453 ANKRD54Q6NXT1 300 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 SYCE2Q6PIF2 218 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 CATSPER3Q86XQ3 398 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 ZNF280BQ86YH2 543 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 PIGOQ8TEQ8 1089 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 IGSF21Q96ID5 467 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 NACC1Q96RE7 527 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 PHF7Q9BWX1 381 aaPredicted RBP12.37□□□□□ -0.43
ABCD4-221ENST00000554453 NFKBIZQ9BYH8 718 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 UBN1Q9NPG3 1134 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
ABCD4-221ENST00000554453 RAPGEFL1Q9UHV5 662 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 USP15Q9Y4E8 981 aaPredicted RBP12.37□□□□□ -0.43
ABCD4-221ENST00000554453 IRAK3Q9Y616 596 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 CNTNAP2Q9UHC6 1331 aa12.37□□□□□ -0.43
ABCD4-221ENST00000554453 MUC6Q6W4X9 2439 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 POTEMA6NI47 508 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 PRR33A8MZF0 331 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 LOC730098B7Z3J9 87 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 ZC3H11AO75152 810 aaKnown RBP eCLIP12.36□□□□□ -0.43
ABCD4-221ENST00000554453 MUTP22033 750 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 GLRA2P23416 452 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 RPA1P27694 616 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 TECP42680 631 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 TRAPPC10P48553 1259 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 RNASELQ05823 741 aaKnown RBP12.36□□□□□ -0.43
ABCD4-221ENST00000554453 GIT2Q14161 759 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 CBX2Q14781 532 aaPredicted RBP12.36□□□□□ -0.43
ABCD4-221ENST00000554453 HERC4Q5GLZ8 1057 aaPredicted RBP12.36□□□□□ -0.43
ABCD4-221ENST00000554453 RNF135Q8IUD6 432 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 VPS52Q8N1B4 723 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 SMG8Q8ND04 991 aaKnown RBP12.36□□□□□ -0.43
ABCD4-221ENST00000554453 ASAP3Q8TDY4 903 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 CCDC51Q96ER9 411 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 CSRNP2Q9H175 543 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 RSAD1Q9HA92 442 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 DBR1Q9UK59 544 aaKnown RBP12.36□□□□□ -0.43
ABCD4-221ENST00000554453 INPP5FQ9Y2H2 1132 aa12.36□□□□□ -0.43
ABCD4-221ENST00000554453 ZDBF2Q9HCK1 2354 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 INPPL1O15357 1258 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 CLASP2O75122 1294 aaKnown RBP12.35□□□□□ -0.43
ABCD4-221ENST00000554453 MED24O75448 989 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 DDHD2O94830 711 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 ERLIN2O94905 339 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 SRGAP2BP0DMP2 458 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 CTSAP10619 480 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 ITGA4P13612 1032 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.43
ABCD4-221ENST00000554453 SLC11A1P49279 550 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 AFF1P51825 1210 aaKnown RBP12.35□□□□□ -0.43
ABCD4-221ENST00000554453 CAPSQ13938 189 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 AMHR2Q16671 573 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 NOTUMQ6P988 496 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 TMEM173Q86WV6 379 aaPredicted RBP12.35□□□□□ -0.43
ABCD4-221ENST00000554453 NOSTRINQ8IVI9 506 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 URGCPQ8TCY9 931 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 CASP10Q92851 521 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 DNAJB4Q9UDY4 337 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 STK39Q9UEW8 545 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 FAN1Q9Y2M0 1017 aa12.35□□□□□ -0.43
ABCD4-221ENST00000554453 A0A1B0GUA9 196 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 FAM86C2PA6NEL3 165 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 TSPAN1O60635 241 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 ARF4P18085 180 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-221ENST00000554453 CYP11B2P19099 503 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 MBTD1Q05BQ5 628 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 PDIA5Q14554 519 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 TTC38Q5R3I4 469 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 MCPH1Q8NEM0 835 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 ERMNQ8TAM6 284 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 CPB2Q96IY4 423 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 CCDC43Q96MW1 224 aaKnown RBP12.34□□□□□ -0.43
ABCD4-221ENST00000554453 FAM193BQ96PV7 902 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-221ENST00000554453 EIF2AQ9BY44 585 aaKnown RBP12.34□□□□□ -0.43
ABCD4-221ENST00000554453 ZBP1Q9H171 429 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 POLR3FQ9H1D9 316 aaPredicted RBP12.34□□□□□ -0.43
ABCD4-221ENST00000554453 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 MIOSQ9NXC5 875 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 IPPQ9Y573 584 aa12.34□□□□□ -0.43
ABCD4-221ENST00000554453 NRP1O14786 923 aa12.33□□□□□ -0.44
ABCD4-221ENST00000554453 B4GALT3O60512 393 aa12.33□□□□□ -0.44
ABCD4-221ENST00000554453 USO1O60763 962 aaKnown RBP12.33□□□□□ -0.44
ABCD4-221ENST00000554453 LILRB3O75022 631 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms