RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 CWH43Q9H720 699 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 AAASQ9NRG9 546 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 FAM105AQ9NUU6 356 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 TYW1Q9NV66 732 aaKnown RBP8.36□□□□□ -1.07
LINC00640-201ENST00000554409 MYH15Q9Y2K3 1946 aa8.36□□□□□ -1.07
LINC00640-201ENST00000554409 CARNS1A5YM72 827 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 K7ELQ4 463 aaPredicted RBP8.35□□□□□ -1.07
LINC00640-201ENST00000554409 NCK2O43639 380 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 TSPAN1O60635 241 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 ERLIN2O94905 339 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 CYP11B2P19099 503 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 IBSPP21815 317 aaPredicted RBP8.35□□□□□ -1.07
LINC00640-201ENST00000554409 HOXA11P31270 313 aaPredicted RBP8.35□□□□□ -1.07
LINC00640-201ENST00000554409 MBTD1Q05BQ5 628 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 CAMK1Q14012 370 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 IL17AQ16552 155 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 ECM1Q16610 540 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 HYIQ5T013 277 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 UBXN11Q5T124 520 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 KRT79Q5XKE5 535 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 CDCA2Q69YH5 1023 aaPredicted RBP8.35□□□□□ -1.07
LINC00640-201ENST00000554409 PADI6Q6TGC4 694 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 DTHD1Q6ZMT9 781 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 LRRC55Q6ZSA7 311 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 MRPL10Q7Z7H8 261 aaKnown RBP8.35□□□□□ -1.07
LINC00640-201ENST00000554409 ABI1Q8IZP0 508 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 SPPL3Q8TCT6 385 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 SNX29Q8TEQ0 813 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 PGBD4Q96DM1 585 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 CCDC51Q96ER9 411 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 POLR3FQ9H1D9 316 aaPredicted RBP8.35□□□□□ -1.07
LINC00640-201ENST00000554409 ALG13Q9NP73 1137 aaKnown RBP8.35□□□□□ -1.07
LINC00640-201ENST00000554409 LZTS1Q9Y250 596 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 PCDHB12Q9Y5F1 795 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 GTF3C3Q9Y5Q9 886 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 EYSQ5T1H1 3165 aa8.35□□□□□ -1.07
LINC00640-201ENST00000554409 CNTNAP2Q9UHC6 1331 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 A0A087WWV3 80 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 ARHGEF35A5YM69 484 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 INO80B-WBP1J3KQ70 363 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 SLC26A4O43511 780 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 FGF18O76093 207 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 EYA4O95677 639 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 BMP15O95972 392 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 BMP1P13497 986 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 NCLP19338 710 aaKnown RBP8.34□□□□□ -1.07
LINC00640-201ENST00000554409 DNAJB1P25685 340 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 PPM1AP35813 382 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 PLCB3Q01970 1234 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 TFF2Q03403 129 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 AMHR2Q16671 573 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 FAM187BQ17R55 369 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 TCEAL5Q5H9L2 206 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 SPOUT1Q5T280 376 aaKnown RBP8.34□□□□□ -1.07
LINC00640-201ENST00000554409 NOTUMQ6P988 496 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 KCNT2Q6UVM3 1135 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 ZNF454Q8N9F8 522 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 RNF169Q8NCN4 708 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 CNNM3Q8NE01 707 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 HELQQ8TDG4 1101 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 SNX21Q969T3 373 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 PABPC5Q96DU9 382 aaKnown RBP8.34□□□□□ -1.07
LINC00640-201ENST00000554409 PRIMPOLQ96LW4 560 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 AK8Q96MA6 479 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 ZNF558Q96NG5 402 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 MMTAG2Q9BU76 263 aaKnown RBP8.34□□□□□ -1.07
LINC00640-201ENST00000554409 CSRNP2Q9H175 543 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 BHMT2Q9H2M3 363 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 UBE2ZQ9H832 354 aaPredicted RBP8.34□□□□□ -1.07
LINC00640-201ENST00000554409 GPRC5CQ9NQ84 441 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 DDX19AQ9NUU7 478 aaKnown RBP8.34□□□□□ -1.07
LINC00640-201ENST00000554409 HCSTQ9UBK5 93 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 DAXXQ9UER7 740 aaPredicted RBP8.34□□□□□ -1.07
LINC00640-201ENST00000554409 KIAA1024Q9UPX6 916 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 PCDHB2Q9Y5E7 798 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 TDRD15B5MCY1 1934 aaKnown RBP8.34□□□□□ -1.07
LINC00640-201ENST00000554409 ZMYM2Q9UBW7 1377 aa8.34□□□□□ -1.07
LINC00640-201ENST00000554409 A0A1B0GUA9 196 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 LRRIQ4A6NIV6 560 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 PP2D1A8MPX8 630 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 FSCN2O14926 492 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 INPPL1O15357 1258 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 OFD1O75665 1012 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 ARF4P18085 180 aaPredicted RBP8.33□□□□□ -1.08
LINC00640-201ENST00000554409 NAMPTP43490 491 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 KCNQ1P51787 676 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 NCBP1Q09161 790 aaKnown RBP8.33□□□□□ -1.08
LINC00640-201ENST00000554409 HYAL1Q12794 435 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 PPP2R5AQ15172 486 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 CTC1Q2NKJ3 1217 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 LEXMQ3ZCV2 418 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 NOMO2Q5JPE7 1267 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 PDE12Q6L8Q7 609 aaKnown RBP8.33□□□□□ -1.08
LINC00640-201ENST00000554409 GLB1LQ6UWU2 654 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 AGMOQ6ZNB7 445 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 ZBTB8OSQ8IWT0 167 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 THNSL1Q8IYQ7 743 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 SLC39A11Q8N1S5 342 aa8.33□□□□□ -1.08
LINC00640-201ENST00000554409 SMG8Q8ND04 991 aaKnown RBP8.33□□□□□ -1.08
LINC00640-201ENST00000554409 POF1BQ8WVV4 589 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms