RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SIX2Q9NPC8 291 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 TNRC6CQ9HCJ0 1690 aaKnown RBP18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 FESP07332 822 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 CCNG1P51959 295 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 ARHGAP4P98171 946 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 TPH2Q8IWU9 490 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 GBP7Q8N8V2 638 aaPredicted RBP18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 TBC1D16Q8TBP0 767 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 DYDC1Q8WWB3 177 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 FAM84AQ96KN4 292 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 THAP2Q9H0W7 228 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 SEMA4AQ9H3S1 761 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 PTPN22Q9Y2R2 807 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 ASTN1O14525 1302 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 AHCYL1O43865 530 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 SUN1O94901 812 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 CTCFP49711 727 aaPredicted RBP18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 RAB27AP51159 221 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 CBWD6Q4V339 395 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 CBWD3Q5JTY5 395 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 CBWD5Q5RIA9 395 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 MGARPQ8TDB4 240 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 HES6Q96HZ4 224 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 BTBD6Q96KE9 485 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 NT5C3AQ9H0P0 336 aa18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 DBR1Q9UK59 544 aaKnown RBP18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
PPP4R3A-202ENST00000554390 TCP11X1B4DZS4 312 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 CALCAP01258 141 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 NEFHP12036 1026 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 EEF2P13639 858 aaKnown RBP18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 PTENP60484 403 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 EPHA7Q15375 998 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 SLC30A9Q6PML9 568 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 ALG3Q92685 438 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 PCIF1Q9H4Z3 704 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 DNM3Q9UQ16 869 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 DPPA5A6NC42 116 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 MEIS2O14770 477 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 GNPTABQ3T906 1256 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 ASRGL1Q7L266 308 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 PHLDB2Q86SQ0 1253 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 CCDC25Q86WR0 208 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 FITM2Q8N6M3 262 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 SLC20A1Q8WUM9 679 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 C18orf8Q96DM3 657 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 MOV10L1Q9BXT6 1211 aaKnown RBP18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 RPTORQ8N122 1335 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 CNTNAP4Q9C0A0 1308 aa18.22■□□□□ 0.51
PPP4R3A-202ENST00000554390 UBAP1LF5GYI3 381 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 FLOT1O75955 427 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 RBM5P52756 815 aaKnown RBP eCLIP18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 DRAP1Q14919 205 aaPredicted RBP18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 TRAPPC3LQ5T215 181 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 ZDHHC24Q6UX98 284 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 SYCE1Q8N0S2 351 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 MYCT1Q8N699 235 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 KRT35Q92764 455 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 DNAJC18Q9H819 358 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 AMFRQ9UKV5 643 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 DDX39AO00148 427 aaKnown RBP18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 KCNJ1P48048 391 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 GABPAQ06546 454 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 NUGGCQ68CJ6 796 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 FOXR2Q6PJQ5 311 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 OTUD6AQ7L8S5 288 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 ZSWIM2Q8NEG5 633 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 POP1Q99575 1024 aaKnown RBP18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 SBF2Q86WG5 1849 aa18.21■□□□□ 0.51
PPP4R3A-202ENST00000554390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.5
PPP4R3A-202ENST00000554390 MYBL1P10243 752 aa18.21■□□□□ 0.5
PPP4R3A-202ENST00000554390 FGFR4P22455 802 aa18.21■□□□□ 0.5
PPP4R3A-202ENST00000554390 KIAA0825Q8IV33 1275 aa18.21■□□□□ 0.5
PPP4R3A-202ENST00000554390 LRRC27Q9C0I9 530 aa18.21■□□□□ 0.5
PPP4R3A-202ENST00000554390 COG5Q9UP83 839 aa18.21■□□□□ 0.5
PPP4R3A-202ENST00000554390 BZW2Q9Y6E2 419 aaKnown RBP18.21■□□□□ 0.5
PPP4R3A-202ENST00000554390 TCRBV7S2A1N4TA0A589 114 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 GNA14O95837 355 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 SNHG28P0DPA3 235 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 ZNF76P36508 570 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 SPIRE1Q08AE8 756 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 KIAA1755Q5JYT7 1200 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 TSC22D3Q99576 134 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 NKX1-2Q9UD57 310 aaPredicted RBP18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 DNAJC12Q9UKB3 198 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 TGFB1I1O43294 461 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 PAPOLAP51003 745 aaKnown RBP18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 AUHQ13825 339 aaKnown RBP18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 JAMLQ86YT9 394 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 TEX9Q8N6V9 391 aa18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 PAPOLBQ9NRJ5 636 aaKnown RBP18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 CNOT7Q9UIV1 285 aaKnown RBP18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 TTC7AQ9ULT0 858 aaPredicted RBP18.2■□□□□ 0.5
PPP4R3A-202ENST00000554390 RASGRF2O14827 1237 aa18.19■□□□□ 0.5
PPP4R3A-202ENST00000554390 KIAA0391O15091 583 aaKnown RBP18.19■□□□□ 0.5
PPP4R3A-202ENST00000554390 SMIM24O75264 130 aa18.19■□□□□ 0.5
PPP4R3A-202ENST00000554390 TBCAO75347 108 aaKnown RBP18.19■□□□□ 0.5
PPP4R3A-202ENST00000554390 ANO7Q6IWH7 933 aa18.19■□□□□ 0.5
PPP4R3A-202ENST00000554390 FAM43BQ6ZT52 329 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms