RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 GLT1D1Q96MS3 346 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 MRPL4Q9BYD3 311 aaKnown RBP8.38□□□□□ -1.07
TDP1-209ENST00000554180 UNC93B1Q9H1C4 597 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 FZD8Q9H461 694 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 IFT122Q9HBG6 1241 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 METTL14Q9HCE5 456 aaKnown RBP8.38□□□□□ -1.07
TDP1-209ENST00000554180 PRMT7Q9NVM4 692 aaPredicted RBP8.38□□□□□ -1.07
TDP1-209ENST00000554180 DMAC2Q9NW81 257 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 IFNKQ9P0W0 207 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 PHF24Q9UPV7 400 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 STYXL1Q9Y6J8 313 aa8.38□□□□□ -1.07
TDP1-209ENST00000554180 CNTNAP2Q9UHC6 1331 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 A0A0U1RQG5 324 aaPredicted RBP8.37□□□□□ -1.07
TDP1-209ENST00000554180 LGALS16A8MUM7 142 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 ACKR2O00590 384 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 TREHO43280 583 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 CAND2O75155 1236 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 TOM1L1O75674 476 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 VTNP04004 478 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 PRKCBP05771 671 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 SRGAP2CP0DJJ0 459 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 HSPA1AP0DMV8 641 aaKnown RBP8.37□□□□□ -1.07
TDP1-209ENST00000554180 HSPA1BP0DMV9 641 aaKnown RBP8.37□□□□□ -1.07
TDP1-209ENST00000554180 CCL5P13501 91 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 PSMC2P35998 433 aaKnown RBP8.37□□□□□ -1.07
TDP1-209ENST00000554180 LIG4P49917 911 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 COPB1P53618 953 aaKnown RBP8.37□□□□□ -1.07
TDP1-209ENST00000554180 CHMP4BP1P59074 171 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 MCCD1P59942 119 aaPredicted RBP8.37□□□□□ -1.07
TDP1-209ENST00000554180 MBTD1Q05BQ5 628 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 ITGA7Q13683 1181 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 HIC1Q14526 733 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 MAN2A1Q16706 1144 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 CCDC40Q4G0X9 1142 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 HSP90AA4PQ58FG1 418 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 ARMCX5Q6P1M9 558 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 RSPH3Q86UC2 560 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 SERINC5Q86VE9 423 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 KSR1Q8IVT5 923 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 TRIM59Q8IWR1 403 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 SLC43A3Q8NBI5 491 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 XXYLT1Q8NBI6 393 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 NLRP7Q8WX94 980 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 ZBTB10Q96DT7 871 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 ZNF333Q96JL9 665 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 FBXL18Q96ME1 805 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 SCLT1Q96NL6 688 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 PPP1R9BQ96SB3 815 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 TUBGCP2Q9BSJ2 902 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 INO80BQ9C086 356 aaPredicted RBP8.37□□□□□ -1.07
TDP1-209ENST00000554180 XPO4Q9C0E2 1151 aaKnown RBP8.37□□□□□ -1.07
TDP1-209ENST00000554180 RNF208Q9H0X6 261 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 ADAMTS10Q9H324 1103 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 KIAA1586Q9HCI6 787 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 ARMCX3Q9UH62 379 aaPredicted RBP8.37□□□□□ -1.07
TDP1-209ENST00000554180 OGDHLQ9ULD0 1010 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 FRMD4BQ9Y2L6 1034 aa8.37□□□□□ -1.07
TDP1-209ENST00000554180 SIP14410 1827 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 A0A087WZ62 844 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 A0A1W2PQ45 241 aaPredicted RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 A0A1W2PQC6 194 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 A0A1W2PQY0 241 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 INO80B-WBP1J3KQ70 363 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 N4BP3O15049 544 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 CLIC2O15247 247 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 EXOC3O60645 756 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 GPR32O75388 356 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 AKAP3O75969 853 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 LDHAP00338 332 aaKnown RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 MYCNP04198 464 aaPredicted RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 GJB1P08034 283 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 SFPQP23246 707 aaKnown RBP eCLIP8.36□□□□□ -1.07
TDP1-209ENST00000554180 ADSSP30520 456 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 MTIF2P46199 727 aaKnown RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 CYP2J2P51589 502 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 LBX1P52954 281 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 NLRP11P59045 1033 aaKnown RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 PTK7Q13308 1070 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 PRPF4BQ13523 1007 aaKnown RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 NR1I3Q14994 352 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 MTFR1Q15390 333 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 FAM47CQ5HY64 1035 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 GDF6Q6KF10 455 aaPredicted RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 SLC39A4Q6P5W5 647 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 RUFY4Q6ZNE9 571 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 TSHZ1Q6ZSZ6 1077 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 INTS8Q75QN2 995 aaKnown RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 USP37Q86T82 979 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 FAM186BQ8IYM0 893 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 POMGNT1Q8WZA1 660 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 BORCS6Q96GS4 357 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 DEFB118Q96PH6 123 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 FDXACB1Q9BRP7 624 aaPredicted RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 CBWD1Q9BRT8 395 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 NOC4LQ9BVI4 516 aaKnown RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 GCOM2Q9BZD3 368 aaPredicted RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 CRISPLD2Q9H0B8 497 aa8.36□□□□□ -1.07
TDP1-209ENST00000554180 FAM49AQ9H0Q0 323 aaPredicted RBP8.36□□□□□ -1.07
TDP1-209ENST00000554180 STARD7Q9NQZ5 370 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms