RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 BRPF3Q9ULD4 1205 aa9.15□□□□□ -0.94
ACTN1-212ENST00000554158 DUSP12Q9UNI6 340 aa9.15□□□□□ -0.94
ACTN1-212ENST00000554158 FAN1Q9Y2M0 1017 aa9.15□□□□□ -0.94
ACTN1-212ENST00000554158 FANCMQ8IYD8 2048 aa9.15□□□□□ -0.94
ACTN1-212ENST00000554158 ARID2Q68CP9 1835 aa9.15□□□□□ -0.95
ACTN1-212ENST00000554158 CNTNAP2Q9UHC6 1331 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 DDX11L8A8MPP1 907 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 C2CD2LO14523 706 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 TRIM66O15016 1216 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 MARCH6O60337 910 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 CSDE1O75534 798 aaKnown RBP9.14□□□□□ -0.95
ACTN1-212ENST00000554158 ERLIN2O94905 339 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 GALTP07902 379 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 USP11P51784 963 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 NLRP5P59047 1200 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 NCBP1Q09161 790 aaKnown RBP9.14□□□□□ -0.95
ACTN1-212ENST00000554158 KANK3Q6NY19 840 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 C15orf39Q6ZRI6 1047 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 CCDC105Q8IYK2 499 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 TRIM22Q8IYM9 498 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 HACE1Q8IYU2 909 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 TMC2Q8TDI7 906 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 SLC22A17Q8WUG5 538 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 SLC7A3Q8WY07 619 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 NRDE2Q9H7Z3 1164 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 KCNK12Q9HB15 430 aa9.14□□□□□ -0.95
ACTN1-212ENST00000554158 MSH4O15457 936 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 PRPF3O43395 683 aaKnown RBP9.13□□□□□ -0.95
ACTN1-212ENST00000554158 ZNF862O60290 1169 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 GLUD1P00367 558 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 LMNAP02545 664 aaKnown RBP9.13□□□□□ -0.95
ACTN1-212ENST00000554158 CFHP08603 1231 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 CDC27P30260 824 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 CIITAP33076 1130 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 ADD1P35611 737 aaKnown RBP9.13□□□□□ -0.95
ACTN1-212ENST00000554158 SLC11A1P49279 550 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 CLCN4P51793 760 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 FUT2Q10981 343 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 PTPN14Q15678 1187 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 CYP26C1Q6V0L0 522 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 LINC01465Q8N7H1 131 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 CNNM3Q8NE01 707 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 PHKBQ93100 1093 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 NXPE3Q969Y0 559 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 KLHL5Q96PQ7 755 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 TMEM175Q9BSA9 504 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 TRAIPQ9BWF2 469 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 SLC26A6Q9BXS9 759 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 NIFKQ9BYG3 293 aaKnown RBP9.13□□□□□ -0.95
ACTN1-212ENST00000554158 UNC45AQ9H3U1 944 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 RSAD1Q9HA92 442 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 UBN1Q9NPG3 1134 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 MAN1C1Q9NR34 630 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 WNT16Q9UBV4 365 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 DNAJB4Q9UDY4 337 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 CA14Q9ULX7 337 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 PCDHB2Q9Y5E7 798 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 RALGAPA1Q6GYQ0 2036 aa9.13□□□□□ -0.95
ACTN1-212ENST00000554158 DOCK6Q96HP0 2047 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 CACNA1IQ9P0X4 2223 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 CCDC195A0A1B0GUA6 201 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 INPPL1O15357 1258 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 ZNF623O75123 536 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 OFD1O75665 1012 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 CNPP09543 421 aaKnown RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 ITGA4P13612 1032 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 OR1G1P47890 313 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 PSMC5P62195 406 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 FOXK1P85037 733 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 EXOSC10Q01780 885 aaKnown RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 UGCGQ16739 394 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 SPECC1Q5M775 1068 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 CWF19L1Q69YN2 538 aaKnown RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 BLOC1S2Q6QNY1 142 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 Q6ZUG5 572 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 DGLUCYQ7Z3D6 616 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 TMEM173Q86WV6 379 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 TCP11Q8WWU5 503 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 PSPC1Q8WXF1 523 aaKnown RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 CRYGNQ8WXF5 182 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 SMG7Q92540 1137 aaKnown RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 SLC5A5Q92911 643 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 BRF1Q92994 677 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 CCDC43Q96MW1 224 aaKnown RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 RNF26Q9BY78 433 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 TRIM6Q9C030 488 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 AGPAT5Q9NUQ2 364 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 COL4A3BPQ9Y5P4 624 aa9.12□□□□□ -0.95
ACTN1-212ENST00000554158 EP300Q09472 2414 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-212ENST00000554158 CLUHO75153 1309 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 TTLL13PA6NNM8 815 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 CPLX1O14810 134 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 PI15O43692 258 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 POMCP01189 267 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 SOD2P04179 222 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 SRGAP2CP0DJJ0 459 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 SRFP11831 508 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 GLUD2P49448 558 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 CREMQ03060 361 aa9.11□□□□□ -0.95
ACTN1-212ENST00000554158 DRP2Q13474 957 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms