RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 TBC1D22BQ9NU19 505 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 FBXL21Q9UKT6 434 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 PCDHA4Q9UN74 947 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 SMC3Q9UQE7 1217 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 PCDHA10Q9Y5I2 948 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 R4GN57 208 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 OTOGLQ3ZCN5 2332 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 IPO5O00410 1097 aaKnown RBP8.67□□□□□ -1.02
ABCD4-220ENST00000553998 KRT37O76014 449 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 EFEMP2O95967 443 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 CNPP09543 421 aaKnown RBP8.67□□□□□ -1.02
ABCD4-220ENST00000553998 SRFP11831 508 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 PDIA4P13667 645 aaKnown RBP8.67□□□□□ -1.02
ABCD4-220ENST00000553998 PHKA2P46019 1235 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 CLCN3P51790 818 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 BECN1Q14457 450 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 NONOQ15233 471 aaKnown RBP eCLIP8.67□□□□□ -1.02
ABCD4-220ENST00000553998 C1orf210Q8IVY1 113 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 MAML2Q8IZL2 1156 aaPredicted RBP8.67□□□□□ -1.02
ABCD4-220ENST00000553998 BLIDQ8IZY5 108 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 REXO1Q8N1G1 1221 aaKnown RBP8.67□□□□□ -1.02
ABCD4-220ENST00000553998 TMEM87AQ8NBN3 555 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 C8orf76Q96K31 380 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 FAM167AQ96KS9 214 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 AIFM3Q96NN9 605 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 CNTNAP3BQ96NU0 1288 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 MAP7D2Q96T17 732 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 EMILIN2Q9BXX0 1053 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 CNTNAP3Q9BZ76 1288 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 SLC2A4RGQ9NR83 387 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 TBC1D13Q9NVG8 400 aa8.67□□□□□ -1.02
ABCD4-220ENST00000553998 CEP250Q9BV73 2442 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 CACNA1BQ00975 2339 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 MYO10Q9HD67 2058 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 IGKV6-21A0A0C4DH24 114 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 ANHXE9PGG2 379 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 DDX39AO00148 427 aaKnown RBP8.66□□□□□ -1.02
ABCD4-220ENST00000553998 ZC3H11AO75152 810 aaKnown RBP eCLIP8.66□□□□□ -1.02
ABCD4-220ENST00000553998 OFD1O75665 1012 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 PSAPP07602 524 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 CFHP08603 1231 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 SKIP12755 728 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 PDCP20941 246 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 SDHBP21912 280 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 KLRC2P26717 231 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 GJB2P29033 226 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 STARD6P59095 220 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 SAFBQ15424 915 aaKnown RBP eCLIP8.66□□□□□ -1.02
ABCD4-220ENST00000553998 TARBP2Q15633 366 aaKnown RBP8.66□□□□□ -1.02
ABCD4-220ENST00000553998 NPY5RQ15761 445 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 ZNF528Q3MIS6 628 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 NOMO2Q5JPE7 1267 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 PLA2G4DQ86XP0 818 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 LRRC71Q8N4P6 559 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 GPR161Q8N6U8 529 aaKnown RBP8.66□□□□□ -1.02
ABCD4-220ENST00000553998 RNF169Q8NCN4 708 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 FBXO18Q8NFZ0 1043 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 HDAC7Q8WUI4 952 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 RSAD2Q8WXG1 361 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 STAMQ92783 540 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 PGBD1Q96JS3 809 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 CEP89Q96ST8 783 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 TBC1D17Q9HA65 648 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 NRBP2Q9NSY0 501 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 DPP7Q9UHL4 492 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 KCNJ14Q9UNX9 436 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 AKT3Q9Y243 479 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 SIT1Q9Y3P8 196 aa8.66□□□□□ -1.02
ABCD4-220ENST00000553998 GPR179Q6PRD1 2367 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 M0R2N6 131 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 ZNF862O60290 1169 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 B4GALT3O60512 393 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 HSP90AA1P07900 732 aaKnown RBP8.65□□□□□ -1.02
ABCD4-220ENST00000553998 GLULP15104 373 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 FGFR4P22455 802 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 CIITAP33076 1130 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 CA8P35219 290 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 KRT2P35908 639 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 ZNF76P36508 570 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 SLC11A1P49279 550 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 RAB27AP51159 221 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 SETQ01105 290 aaPredicted RBP8.65□□□□□ -1.02
ABCD4-220ENST00000553998 RSPO4Q2I0M5 234 aaPredicted RBP8.65□□□□□ -1.02
ABCD4-220ENST00000553998 GLB1LQ6UWU2 654 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 KRT25Q7Z3Z0 450 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 MRPL10Q7Z7H8 261 aaKnown RBP8.65□□□□□ -1.02
ABCD4-220ENST00000553998 ZNF280BQ86YH2 543 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 CKAP2LQ8IYA6 745 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 DIS3L2Q8IYB7 885 aaKnown RBP8.65□□□□□ -1.02
ABCD4-220ENST00000553998 GPR65Q8IYL9 337 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 RNF168Q8IYW5 571 aaPredicted RBP8.65□□□□□ -1.02
ABCD4-220ENST00000553998 DCLK2Q8N568 766 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 GPR152Q8TDT2 470 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 RIN2Q8WYP3 895 aaPredicted RBP8.65□□□□□ -1.02
ABCD4-220ENST00000553998 ZNF707Q96C28 371 aaPredicted RBP8.65□□□□□ -1.02
ABCD4-220ENST00000553998 MYADMQ96S97 322 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 TMEM175Q9BSA9 504 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 ZNF577Q9BSK1 485 aa8.65□□□□□ -1.02
ABCD4-220ENST00000553998 GCOM2Q9BZD3 368 aaPredicted RBP8.65□□□□□ -1.02
ABCD4-220ENST00000553998 RXFP1Q9HBX9 757 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms