RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 KIAA1671Q9BY89 1806 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 ZNF623O75123 536 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 PRKCBP05771 671 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 NPTX2P47972 431 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 EFNA5P52803 228 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 DMP1Q13316 513 aaPredicted RBP25.68■■□□□ 1.7
NEK9-203ENST00000553945 CLLU1OSQ5K130 101 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 PPP4R3CPQ6ZMV5 832 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 KCNG4Q8TDN1 519 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 LARP4BQ92615 738 aaKnown RBP25.68■■□□□ 1.7
NEK9-203ENST00000553945 CLP1Q92989 425 aaKnown RBP25.68■■□□□ 1.7
NEK9-203ENST00000553945 LPPQ93052 612 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 CCDC51Q96ER9 411 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 PRIMPOLQ96LW4 560 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 PANK2Q9BZ23 570 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 FZD8Q9H461 694 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 RWDD3Q9Y3V2 267 aa25.68■■□□□ 1.7
NEK9-203ENST00000553945 CUTAO60888 179 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 KRT18P05783 430 aaKnown RBP25.67■■□□□ 1.7
NEK9-203ENST00000553945 LINC00271P0C7V0 271 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 DDIT3P35638 169 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 CACNB1Q02641 598 aaPredicted RBP25.67■■□□□ 1.7
NEK9-203ENST00000553945 MYO9BQ13459 2157 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 FAM187BQ17R55 369 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 TMEM132AQ24JP5 1023 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 SPOUT1Q5T280 376 aaKnown RBP25.67■■□□□ 1.7
NEK9-203ENST00000553945 HELQQ8TDG4 1101 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 PGBD4Q96DM1 585 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 CASD1Q96PB1 797 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 CCDC113Q9H0I3 377 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 C17orf75Q9HAS0 396 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 KMT5AQ9NQR1 393 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 STK17AQ9UEE5 414 aa25.67■■□□□ 1.7
NEK9-203ENST00000553945 GTPBP6O43824 516 aaPredicted RBP25.66■■□□□ 1.7
NEK9-203ENST00000553945 NCLP19338 710 aaKnown RBP25.66■■□□□ 1.7
NEK9-203ENST00000553945 BMPR1AP36894 532 aa25.66■■□□□ 1.7
NEK9-203ENST00000553945 ME1P48163 572 aa25.66■■□□□ 1.7
NEK9-203ENST00000553945 PRPF4BQ13523 1007 aaKnown RBP25.66■■□□□ 1.7
NEK9-203ENST00000553945 CCDC73Q6ZRK6 1079 aa25.66■■□□□ 1.7
NEK9-203ENST00000553945 CDR2LQ86X02 465 aaPredicted RBP25.66■■□□□ 1.7
NEK9-203ENST00000553945 MAFAQ8NHW3 353 aaPredicted RBP25.66■■□□□ 1.7
NEK9-203ENST00000553945 EIF2AQ9BY44 585 aaKnown RBP25.66■■□□□ 1.7
NEK9-203ENST00000553945 TYW1Q9NV66 732 aaKnown RBP25.66■■□□□ 1.7
NEK9-203ENST00000553945 REV3LO60673 3130 aa25.66■■□□□ 1.7
NEK9-203ENST00000553945 MYH11P35749 1972 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 CNTNAP2Q9UHC6 1331 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 K7ERI5 159 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 LPXNO60711 386 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 PLS3P13797 630 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 STAT6P42226 847 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 GPM6BQ13491 265 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 MRPL10Q7Z7H8 261 aaKnown RBP25.65■■□□□ 1.7
NEK9-203ENST00000553945 REEP2Q9BRK0 252 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 TRIM6Q9C030 488 aaPredicted RBP25.65■■□□□ 1.7
NEK9-203ENST00000553945 HCSTQ9UBK5 93 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 USP20Q9Y2K6 914 aa25.65■■□□□ 1.7
NEK9-203ENST00000553945 A0A1B0GUA9 196 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 TTLL13PA6NNM8 815 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 MEIS3P2A8K0S8 358 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 H3BNC9 293 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 ACKR2O00590 384 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 SLC16A4O15374 487 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 RB1P06400 928 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 SLC27A1Q6PCB7 646 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 GLB1LQ6UWU2 654 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 MICALL1Q8N3F8 863 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 PDILTQ8N807 584 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 CNNM3Q8NE01 707 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 CHAMP1Q96JM3 812 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 RCOR1Q9UKL0 485 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 ODF2LQ9ULJ1 636 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 RBM19Q9Y4C8 960 aaKnown RBP25.64■■□□□ 1.7
NEK9-203ENST00000553945 IPPQ9Y573 584 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 ATP6V1DQ9Y5K8 247 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 MTCH2Q9Y6C9 303 aa25.64■■□□□ 1.7
NEK9-203ENST00000553945 A0A087X0B3 334 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 C5orf67F2Z3F1 127 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 NPTXRO95502 500 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 EDN1P05305 212 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 ITGA4P13612 1032 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 KRT85P78386 507 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 NAALADL2Q58DX5 795 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 AXDND1Q5T1B0 1012 aaPredicted RBP25.63■■□□□ 1.69
NEK9-203ENST00000553945 SHC4Q6S5L8 630 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 LRRC43Q8N309 656 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 SMG8Q8ND04 991 aaKnown RBP25.63■■□□□ 1.69
NEK9-203ENST00000553945 PPM1EQ8WY54 764 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 C11orf84Q9BUA3 381 aaPredicted RBP25.63■■□□□ 1.69
NEK9-203ENST00000553945 KCNG1Q9UIX4 513 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 PCDHA7Q9UN72 937 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 INPP5FQ9Y2H2 1132 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 PHLPP2Q6ZVD8 1323 aa25.63■■□□□ 1.69
NEK9-203ENST00000553945 N4BP3O15049 544 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 FAM13AO94988 1023 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 SMTNP53814 917 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 GIT2Q14161 759 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 CCDC85BQ15834 202 aaPredicted RBP25.62■■□□□ 1.69
NEK9-203ENST00000553945 AGMOQ6ZNB7 445 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 LRRC55Q6ZSA7 311 aa25.62■■□□□ 1.69
NEK9-203ENST00000553945 SV2BQ7L1I2 683 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms