RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 DOK3Q7L591 496 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 FAM83AQ86UY5 434 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 GLB1L3Q8NCI6 653 aaPredicted RBP3.67□□□□□ -1.82
SRP54-204ENST00000553923 TUBGCP5Q96RT8 1024 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 LRFN3Q9BTN0 628 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 MRPL4Q9BYD3 311 aaKnown RBP3.67□□□□□ -1.82
SRP54-204ENST00000553923 AKIP1Q9NQ31 210 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 TRPM5Q9NZQ8 1165 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 EIF2B4Q9UI10 523 aaKnown RBP3.67□□□□□ -1.82
SRP54-204ENST00000553923 FRMD4BQ9Y2L6 1034 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 INSL6Q9Y581 213 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 SPATA31A6Q5VVP1 1343 aa3.67□□□□□ -1.82
SRP54-204ENST00000553923 GAGE12BA1L429 117 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 PIPSLA2A3N6 862 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 GAGE12HA6NDE8 117 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 M0R2C6 588 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 RNASET2O00584 256 aaKnown RBP3.66□□□□□ -1.82
SRP54-204ENST00000553923 OPHN1O60890 802 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 ZSCAN20P17040 1043 aaPredicted RBP3.66□□□□□ -1.82
SRP54-204ENST00000553923 RASA3Q14644 834 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 ZNF362Q5T0B9 420 aaPredicted RBP3.66□□□□□ -1.82
SRP54-204ENST00000553923 BTNL9Q6UXG8 535 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 GDF7Q7Z4P5 450 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 SYT12Q8IV01 421 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 CKAP2LQ8IYA6 745 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 CMTR2Q8IYT2 770 aaKnown RBP3.66□□□□□ -1.82
SRP54-204ENST00000553923 RPGRQ92834 1020 aaKnown RBP3.66□□□□□ -1.82
SRP54-204ENST00000553923 DCLRE1CQ96SD1 692 aaKnown RBP3.66□□□□□ -1.82
SRP54-204ENST00000553923 TEX101Q9BY14 249 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 MTG2Q9H4K7 406 aa3.66□□□□□ -1.82
SRP54-204ENST00000553923 CCDC85CA6NKD9 419 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 GLRX3O76003 335 aaKnown RBP3.65□□□□□ -1.83
SRP54-204ENST00000553923 ALDH1A2O94788 518 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 FSBPO95073 299 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 NDUFA10O95299 355 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 CASRP41180 1078 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 AVPR1BP47901 424 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 ADCY2Q08462 1091 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 FOXF2Q12947 444 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 MAN2A1Q16706 1144 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 CREB3L3Q68CJ9 461 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 ESRP1Q6NXG1 681 aaKnown RBP3.65□□□□□ -1.83
SRP54-204ENST00000553923 NME9Q86XW9 330 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 UNC5BQ8IZJ1 945 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 LCORLQ8N3X6 602 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 KIAA1958Q8N8K9 716 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 CHST14Q8NCH0 376 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 FAM193BQ96PV7 902 aaPredicted RBP3.65□□□□□ -1.83
SRP54-204ENST00000553923 UIMC1Q96RL1 719 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 ADAM2Q99965 735 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 SIRPGQ9P1W8 387 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 SYNPO2Q9UMS6 1093 aa3.65□□□□□ -1.83
SRP54-204ENST00000553923 CCDC163A0A0D9SF12 145 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 FAM221BA6H8Z2 402 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 MARCH11A6NNE9 402 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 NRP1O14786 923 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 STK10O94804 968 aaKnown RBP3.64□□□□□ -1.83
SRP54-204ENST00000553923 PRPF6O94906 941 aaKnown RBP3.64□□□□□ -1.83
SRP54-204ENST00000553923 HKR1P10072 659 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 EGR2P11161 476 aaPredicted RBP3.64□□□□□ -1.83
SRP54-204ENST00000553923 MPLP40238 635 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 WNT3AP56704 352 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 CD69Q07108 199 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 SERINC3Q13530 473 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 METRNLQ641Q3 311 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 KIAA1841Q6NSI8 718 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 ZCCHC8Q6NZY4 707 aaKnown RBP3.64□□□□□ -1.83
SRP54-204ENST00000553923 BOLLQ8N9W6 283 aaKnown RBP3.64□□□□□ -1.83
SRP54-204ENST00000553923 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.64□□□□□ -1.83
SRP54-204ENST00000553923 TESQ9UGI8 421 aaKnown RBP3.64□□□□□ -1.83
SRP54-204ENST00000553923 SALL3Q9BXA9 1300 aa3.64□□□□□ -1.83
SRP54-204ENST00000553923 PTPDC1A2A3K4 754 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 DIRC3C9JPN6 131 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 LY86O95711 162 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 ESRRBO95718 433 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 PLA2G5P39877 138 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 ELLP55199 621 aaPredicted RBP3.63□□□□□ -1.83
SRP54-204ENST00000553923 NHLH1Q02575 133 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 ADCY1Q08828 1119 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 EPHA10Q5JZY3 1008 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 ABHD17BQ5VST6 288 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
SRP54-204ENST00000553923 DRICH1Q6PGQ1 229 aaPredicted RBP3.63□□□□□ -1.83
SRP54-204ENST00000553923 MICALCLQ6ZW33 695 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 XYLT1Q86Y38 959 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 PHYKPLQ8IUZ5 450 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 SRRM1Q8IYB3 904 aaKnown RBP3.63□□□□□ -1.83
SRP54-204ENST00000553923 CPEB3Q8NE35 698 aaKnown RBP3.63□□□□□ -1.83
SRP54-204ENST00000553923 OR5M3Q8NGP4 307 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 ASB10Q8WXI3 467 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 NELL1Q92832 810 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 IL17RAQ96F46 866 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 ELF4Q99607 663 aaPredicted RBP3.63□□□□□ -1.83
SRP54-204ENST00000553923 NOL10Q9BSC4 688 aaKnown RBP3.63□□□□□ -1.83
SRP54-204ENST00000553923 MYL10Q9BUA6 226 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 RSAD1Q9HA92 442 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 SAMD15Q9P1V8 674 aa3.63□□□□□ -1.83
SRP54-204ENST00000553923 TNPO3Q9Y5L0 923 aaKnown RBP3.63□□□□□ -1.83
SRP54-204ENST00000553923 PROB1E7EW31 1015 aa3.62□□□□□ -1.83
SRP54-204ENST00000553923 ELL2O00472 640 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms