RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 IPO7O95373 1038 aaKnown RBP13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 TUBB4AP04350 444 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 FAM228BP0C875 321 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 KRT13P13646 458 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 COPB2P35606 906 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 VAV2P52735 878 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 HUNKP57058 714 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 PTK2Q05397 1052 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 ELF2Q15723 593 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 PHLDB3Q6NSJ2 640 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 ZNF571Q7Z3V5 609 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 SLC7A3Q8WY07 619 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 PACSIN1Q9BY11 444 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 HAPLN2Q9GZV7 340 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 CPA4Q9UI42 421 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 MRFAP1Q9Y605 127 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 TRPM7Q96QT4 1865 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 GFPT2O94808 682 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 ADCYAP1R1P41586 468 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 WNT7BP56706 349 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 PPP2R5AQ15172 486 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 ARHGAP44Q17R89 818 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 ERCC6LQ2NKX8 1250 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 FAM160B1Q5W0V3 765 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 ANKRD23Q86SG2 305 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 C12orf56Q8IXR9 622 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 LMO3Q8TAP4 145 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 EPC1Q9H2F5 836 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 AZI2Q9H6S1 392 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 AIPL1Q9NZN9 384 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 ARL2P36404 184 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 JAM2P57087 298 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 MAP2K1Q02750 393 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 CAPSQ13938 189 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 SEZ6Q53EL9 994 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 LMBRD2Q68DH5 695 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 TAPT1Q6NXT6 567 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 GPR142Q7Z601 462 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 ARHGEF19Q8IW93 802 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 AFAP1L1Q8TED9 768 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 FAM213AQ9BRX8 229 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 GPR88Q9GZN0 384 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 DNAJC12Q9UKB3 198 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 CAPN6Q9Y6Q1 641 aa13.87□□□□□ -0.19
VIPAS39-206ENST00000553888 MOCS3O95396 460 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 LCA5LO95447 670 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 ITGBL1O95965 494 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 MAGEA1P43355 309 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 CCNA1P78396 465 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 PLCB4Q15147 1175 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 ZBTB41Q5SVQ8 909 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 MAMDC4Q6UXC1 1216 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 INTS8Q75QN2 995 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 MORC4Q8TE76 937 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 PPP1R13LQ8WUF5 828 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 KAT5Q92993 513 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 MPHOSPH6Q99547 160 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 TMEM117Q9H0C3 514 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 C17orf75Q9HAS0 396 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 EXOC7Q9UPT5 735 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 GTPBP10A4D1E9 387 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 ATP1A1P05023 1023 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 PRPF31Q8WWY3 499 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 SYN2Q92777 582 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 RNPEPQ9H4A4 650 aa13.86□□□□□ -0.19
VIPAS39-206ENST00000553888 CTAGE9A4FU28 777 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 LRRIQ3A6PVS8 624 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 IGF2BP3O00425 579 aaKnown RBP eCLIP13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 BUB1O43683 1085 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 SRGAP2O75044 1071 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 SNAI1O95863 264 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 DLATP10515 647 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 ACOT2P49753 483 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 FKBP1BP68106 108 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 IGBP1P78318 339 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 KIF5AQ12840 1032 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 MYBPC2Q14324 1141 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 TTLL4Q14679 1199 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 DRAP1Q14919 205 aaPredicted RBP13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 DEPTORQ8TB45 409 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 SEMA4DQ92854 862 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 ERO1AQ96HE7 468 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 PPP1R16BQ96T49 567 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 TARS2Q9BW92 718 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 ANKFY1Q9P2R3 1169 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 PUF60Q9UHX1 559 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 IVNS1ABPQ9Y6Y0 642 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 SSU72P8A0A1W2PR75 194 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 ASB14A6NK59 587 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 KRT86O43790 486 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 ZNF286BP0CG31 522 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 SRGAP2CP0DJJ0 459 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 LIG4P49917 911 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 RTP1P59025 263 aa13.85□□□□□ -0.19
VIPAS39-206ENST00000553888 ARHGAP1Q07960 439 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms