RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ALAS1P13196 640 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 PEX3P56589 373 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 PTENP60484 403 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 PTGISQ16647 500 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 CARD9Q9H257 536 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 ZNF277Q9NRM2 450 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-211ENST00000553882 ZNF536O15090 1300 aa15.74■□□□□ 0.11
ACTN1-211ENST00000553882 A6NNZ2 444 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 E7EVH7 732 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 EIF2AK2P19525 551 aaKnown RBP15.73■□□□□ 0.11
ACTN1-211ENST00000553882 TMOD1P28289 359 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 CETN1Q12798 172 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 UGCGQ16739 394 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 TUBB8Q3ZCM7 444 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 TTC31Q49AM3 519 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-211ENST00000553882 C1orf220Q5T0J3 134 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 LRIG3Q6UXM1 1119 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 PPM1KQ8N3J5 372 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 ATP8B4Q8TF62 1192 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 CCDC127Q96BQ5 260 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 FMO2Q99518 471 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 KIFC3Q9BVG8 833 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 COL2A1P02458 1487 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-211ENST00000553882 ICAM1P05362 532 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 HSD17B4P51659 736 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 MRPS9P82933 396 aaKnown RBP15.73■□□□□ 0.11
ACTN1-211ENST00000553882 MAP2K1Q02750 393 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-211ENST00000553882 MESDQ14696 234 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 LLGL1Q15334 1064 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 TKFCQ3LXA3 575 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 HAUS6Q7Z4H7 955 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 LARGE2Q8N3Y3 721 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 XXYLT1Q8NBI6 393 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 C18orf8Q96DM3 657 aa15.73■□□□□ 0.11
ACTN1-211ENST00000553882 TTC7AQ9ULT0 858 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-211ENST00000553882 NOVA2Q9UNW9 492 aaKnown RBP15.73■□□□□ 0.11
ACTN1-211ENST00000553882 GOLGA6L10A0A0M3HER8 536 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 BACH1O14867 736 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 SGPL1O95470 568 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 PLS3P13797 630 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 YWHABP31946 246 aaKnown RBP15.72■□□□□ 0.11
ACTN1-211ENST00000553882 MTMR1Q13613 665 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 TMEM132AQ24JP5 1023 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 KRT71Q3SY84 523 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 PLA2G4FQ68DD2 849 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 CPNE8Q86YQ8 564 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 SEC14L1Q92503 715 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 SAAL1Q96ER3 474 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 BTBD6Q96KE9 485 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 ACCSQ96QU6 501 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 TMEM206Q9H813 350 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 RAVER2Q9HCJ3 691 aaKnown RBP15.72■□□□□ 0.11
ACTN1-211ENST00000553882 A0A087WUV0 522 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-211ENST00000553882 HMGB2P26583 209 aaKnown RBP15.72■□□□□ 0.11
ACTN1-211ENST00000553882 QARSP47897 775 aaKnown RBP15.72■□□□□ 0.11
ACTN1-211ENST00000553882 MXI1P50539 228 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 PLTPP55058 493 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 SF3B2Q13435 895 aaKnown RBP15.72■□□□□ 0.11
ACTN1-211ENST00000553882 TNIP1Q15025 636 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 EPC2Q52LR7 807 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 SLC47A2Q86VL8 602 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 MYCBPAPQ8TBZ2 947 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 ZNF473Q8WTR7 871 aaKnown RBP15.72■□□□□ 0.11
ACTN1-211ENST00000553882 BBXQ8WY36 941 aaPredicted RBP15.72■□□□□ 0.11
ACTN1-211ENST00000553882 CCT8L2Q96SF2 557 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 PCDHB18PQ96TA0 734 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 POP1Q99575 1024 aaKnown RBP15.72■□□□□ 0.11
ACTN1-211ENST00000553882 TMEM117Q9H0C3 514 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 FAM114A2Q9NRY5 505 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 SNX24Q9Y343 169 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 DAAM1Q9Y4D1 1078 aa15.72■□□□□ 0.11
ACTN1-211ENST00000553882 CYP26A1O43174 497 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 ADRB2P07550 413 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 MYCLP12524 364 aaPredicted RBP15.71■□□□□ 0.11
ACTN1-211ENST00000553882 VCAM1P19320 739 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 PTGER2P43116 358 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 MTMR3Q13615 1198 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 EMC10Q5UCC4 262 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 NOP9Q86U38 636 aaKnown RBP15.71■□□□□ 0.11
ACTN1-211ENST00000553882 NLRP14Q86W24 1093 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 CBWD2Q8IUF1 395 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 RHOT2Q8IXI1 618 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 SUPT20HQ8NEM7 779 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 NEK9Q8TD19 979 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 CLEC4DQ8WXI8 215 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 RAB17Q9H0T7 212 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 AGO4Q9HCK5 861 aaKnown RBP15.71■□□□□ 0.11
ACTN1-211ENST00000553882 ERLIN2O94905 339 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 RFX1P22670 979 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 MAGOHP61326 146 aaKnown RBP15.71■□□□□ 0.11
ACTN1-211ENST00000553882 MKRN4PQ13434 485 aaPredicted RBP15.71■□□□□ 0.11
ACTN1-211ENST00000553882 FAM102BQ5T8I3 360 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 RUFY4Q6ZNE9 571 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 FMNL3Q8IVF7 1028 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 C1orf131Q8NDD1 294 aaKnown RBP15.71■□□□□ 0.11
ACTN1-211ENST00000553882 EPS8L1Q8TE68 723 aa15.71■□□□□ 0.11
ACTN1-211ENST00000553882 MAGOHBQ96A72 148 aaKnown RBP15.71■□□□□ 0.11
ACTN1-211ENST00000553882 NAP1L3Q99457 506 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 321.6 ms