RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 CCDC65Q8IXS2 484 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 DBF4BQ8NFT6 615 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 SEPT1Q8WYJ6 367 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 MSLNLQ96KJ4 702 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 RPGRIP1Q96KN7 1286 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 BPIFA3Q9BQP9 254 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 DNAJC25Q9H1X3 360 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 GRPEL1Q9HAV7 217 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 ANKEF1Q9NU02 776 aa16■□□□□ 0.15
SHMT2-208ENST00000553868 DBR1Q9UK59 544 aaKnown RBP16■□□□□ 0.15
SHMT2-208ENST00000553868 NOP56O00567 594 aaKnown RBP15.99■□□□□ 0.15
SHMT2-208ENST00000553868 BACH1O14867 736 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 RHOBTB3O94955 611 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 ATG7O95352 703 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 GH1P01241 217 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 CASP1P29466 404 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 CTNNB1P35222 781 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 NDUFV1P49821 464 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 SP4Q02446 784 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 RBL2Q08999 1139 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 ADAM15Q13444 863 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 STIM1Q13586 685 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 LAMC2Q13753 1193 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 UVSSAQ2YD98 709 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 DPCR1Q3MIW9 517 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 BRDTQ58F21 947 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-208ENST00000553868 ZNF658Q5TYW1 1059 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-208ENST00000553868 ABHD15Q6UXT9 468 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 DGLUCYQ7Z3D6 616 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 DDX12PQ92771 950 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 RBSNQ9H1K0 784 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 GABBR1Q9UBS5 961 aa15.99■□□□□ 0.15
SHMT2-208ENST00000553868 BECN2A8MW95 431 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 ACACBO00763 2458 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 KPNA6O60684 536 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 PARNO95453 639 aaKnown RBP15.98■□□□□ 0.15
SHMT2-208ENST00000553868 IDEP14735 1019 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 CYP11B2P19099 503 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 TPM4P67936 248 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 ZNF200P98182 395 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-208ENST00000553868 PSMD2Q13200 908 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 LY6KQ17RY6 165 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 RALGAPA2Q2PPJ7 1873 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 TRIM71Q2Q1W2 868 aaKnown RBP15.98■□□□□ 0.15
SHMT2-208ENST00000553868 KMT5BQ4FZB7 885 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 ISM2Q6H9L7 571 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 SWSAP1Q6NVH7 229 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 TMEM105Q8N8V8 129 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 RNF214Q8ND24 703 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 PIGOQ8TEQ8 1089 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 KAT2BQ92831 832 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 TIPINQ9BVW5 301 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 AZI2Q9H6S1 392 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 ZNF302Q9NR11 478 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 CLEC1BQ9P126 229 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 KIAA1217Q5T5P2 1943 aa15.98■□□□□ 0.15
SHMT2-208ENST00000553868 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 GOLGA6L19H0YKK7 550 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 KLRC4O43908 158 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 TBCAO75347 108 aaKnown RBP15.97■□□□□ 0.15
SHMT2-208ENST00000553868 ARIH2O95376 493 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 YWHABP31946 246 aaKnown RBP15.97■□□□□ 0.15
SHMT2-208ENST00000553868 C11orf57Q6ZUT1 292 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-208ENST00000553868 DYMQ7RTS9 669 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 ANP32BQ92688 251 aaKnown RBP15.97■□□□□ 0.15
SHMT2-208ENST00000553868 EMID1Q96A84 441 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-208ENST00000553868 RIPOR3Q96MK2 946 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 SPATA33Q96N06 139 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 OSBPL7Q9BZF2 842 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 CBX8Q9HC52 389 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 HDAC6Q9UBN7 1215 aa15.97■□□□□ 0.15
SHMT2-208ENST00000553868 USP15Q9Y4E8 981 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-208ENST00000553868 IGSF9BQ9UPX0 1349 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 IGKV6D-21A0A0A0MT36 114 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 SORBS3O60504 671 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 GAP43P17677 238 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 ERCC5P28715 1186 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-208ENST00000553868 SLC26A2P50443 739 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 UGCGQ16739 394 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 XKR3Q5GH77 459 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 SESTD1Q86VW0 696 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 SMRP1Q8NCR6 262 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 AFG1LQ8WV93 481 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 TOP1MTQ969P6 601 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 DNAJC19Q96DA6 116 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 FAM167AQ96KS9 214 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 PANK4Q9NVE7 773 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 WRAP73Q9P2S5 460 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-208ENST00000553868 GTF2IRD1Q9UHL9 959 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 ODF2LQ9ULJ1 636 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 COL4A3BPQ9Y5P4 624 aa15.96■□□□□ 0.15
SHMT2-208ENST00000553868 MAFBQ9Y5Q3 323 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-208ENST00000553868 GSTTP1A0A1W2PQM5 241 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 IKBKBO14920 756 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 KIF20AO95235 890 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 LINC00271P0C7V0 271 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 GUCY2CP25092 1073 aa15.95■□□□□ 0.14
SHMT2-208ENST00000553868 TCF7P36402 384 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-208ENST00000553868 RARRES1P49788 294 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms