RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 NLRP4Q96MN2 994 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 FAM161BQ96MY7 647 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 GAS2L1Q99501 681 aaPredicted RBP9.26□□□□□ -0.93
PSEN1-209ENST00000553855 ZNF576Q9H609 170 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 C1orf112Q9NSG2 853 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 DBR1Q9UK59 544 aaKnown RBP9.26□□□□□ -0.93
PSEN1-209ENST00000553855 ST3GAL5Q9UNP4 418 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 KIAA1024Q9UPX6 916 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 NOC2LQ9Y3T9 749 aaKnown RBP9.26□□□□□ -0.93
PSEN1-209ENST00000553855 COL4A3BPQ9Y5P4 624 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 TRIOBPQ9H2D6 2365 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 TANC1Q9C0D5 1861 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 DNAH12Q6ZR08 3092 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 A0A087WZ62 844 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 IGKV6-21A0A0C4DH24 114 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 SLC26A4O43511 780 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 GPR32O75388 356 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 MED24O75448 989 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 ERLIN2O94905 339 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 STBD1O95210 358 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 GJB5O95377 273 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 ADH1BP00325 375 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 DARSP14868 501 aaKnown RBP9.25□□□□□ -0.93
PSEN1-209ENST00000553855 LONP1P36776 959 aaKnown RBP9.25□□□□□ -0.93
PSEN1-209ENST00000553855 PHKA2P46019 1235 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 RARRES1P49788 294 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 DEFB103AP81534 67 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 SF3A1Q15459 793 aaKnown RBP9.25□□□□□ -0.93
PSEN1-209ENST00000553855 EML3Q32P44 896 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 TJAP1Q5JTD0 557 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 FAM102BQ5T8I3 360 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 PHLDB3Q6NSJ2 640 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.25□□□□□ -0.93
PSEN1-209ENST00000553855 CATSPER4Q7RTX7 472 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 ZBTB33Q86T24 672 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 NPAS4Q8IUM7 802 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 C4orf32Q8N8J7 132 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 IGSF22Q8N9C0 903 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 TMEM143Q96AN5 459 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 IFT74Q96LB3 600 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 AK8Q96MA6 479 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 FDXACB1Q9BRP7 624 aaPredicted RBP9.25□□□□□ -0.93
PSEN1-209ENST00000553855 SEMA6BQ9H3T3 888 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 DHX33Q9H6R0 707 aaKnown RBP9.25□□□□□ -0.93
PSEN1-209ENST00000553855 DDX19AQ9NUU7 478 aaKnown RBP9.25□□□□□ -0.93
PSEN1-209ENST00000553855 DACT1Q9NYF0 836 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 WRAP73Q9P2S5 460 aaPredicted RBP9.25□□□□□ -0.93
PSEN1-209ENST00000553855 PCDHB7Q9Y5E2 793 aa9.25□□□□□ -0.93
PSEN1-209ENST00000553855 ENPP3O14638 875 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 SSBP05455 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
PSEN1-209ENST00000553855 CA3P07451 260 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 SRGAP2CP0DJJ0 459 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 SPATA31C1P0DKV0 1188 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 CEBPZQ03701 1054 aaKnown RBP9.24□□□□□ -0.93
PSEN1-209ENST00000553855 LAMTOR4Q0VGL1 99 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 RESTQ13127 1097 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 PPP2R5AQ15172 486 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 STK38Q15208 465 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 PCBP1Q15365 356 aaKnown RBP eCLIP9.24□□□□□ -0.93
PSEN1-209ENST00000553855 SLC24A5Q71RS6 500 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 Q7L0L9 218 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 MAEAQ7L5Y9 396 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 SRGAP1Q7Z6B7 1085 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 CABP7Q86V35 215 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 FAM228AQ86W67 206 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 ZBTB8OSQ8IWT0 167 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 ABI1Q8IZP0 508 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 FIBCD1Q8N539 461 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 LINC01465Q8N7H1 131 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 RNF149Q8NC42 400 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 PRPF31Q8WWY3 499 aaKnown RBP9.24□□□□□ -0.93
PSEN1-209ENST00000553855 TOP1MTQ969P6 601 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 ZNF668Q96K58 619 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-209ENST00000553855 SAMD11Q96NU1 681 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 ADAM2Q99965 735 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 ADAMTS10Q9H324 1103 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 AGO3Q9H9G7 860 aaKnown RBP9.24□□□□□ -0.93
PSEN1-209ENST00000553855 ERVK-5Q9HDB9 667 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 CHST12Q9NRB3 414 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 CCDC39Q9UFE4 941 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 KCNG1Q9UIX4 513 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 MTMR6Q9Y217 621 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 RWDD3Q9Y3V2 267 aa9.24□□□□□ -0.93
PSEN1-209ENST00000553855 MYH9P35579 1960 aaKnown RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 LRRIQ4A6NIV6 560 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 INO80B-WBP1J3KQ70 363 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 ZBTB39O15060 712 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 EYA4O95677 639 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 ZSCAN22P10073 491 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 FOSL2P15408 326 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 SARSP49591 514 aaKnown RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 BTG3Q14201 252 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 SPOUT1Q5T280 376 aaKnown RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 TWF2Q6IBS0 349 aaKnown RBP9.23□□□□□ -0.93
PSEN1-209ENST00000553855 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 HACE1Q8IYU2 909 aa9.23□□□□□ -0.93
PSEN1-209ENST00000553855 DEPTORQ8TB45 409 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms