RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 CTNNA2P26232 953 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC8A1P32418 973 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 MAN1A1P33908 653 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 RFC4P35249 363 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 SOX11P35716 441 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 FMO5P49326 533 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 MNAT1P51948 309 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 GALCP54803 685 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 LSM11P83369 360 aaKnown RBP eCLIP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 DR1Q01658 176 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 KLRC3Q07444 240 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 DHX9Q08211 1270 aaKnown RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 NEDD9Q14511 834 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 PLS1Q14651 629 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 SLMAPQ14BN4 828 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC4A8Q2Y0W8 1093 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 KRT71Q3SY84 523 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 FBXW10Q5XX13 1052 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 DENND2CQ68D51 928 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 CYB5D1Q6P9G0 228 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 ADGRD1Q6QNK2 874 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 CRELD2Q6UXH1 353 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 SYDE1Q6ZW31 735 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 CYFIP1Q7L576 1253 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 HS2ST1Q7LGA3 356 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 DAAM2Q86T65 1068 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 FAM186BQ8IYM0 893 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 UBL4BQ8N7F7 174 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 GBP7Q8N8V2 638 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 ANKS4BQ8N8V4 417 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 LNX1Q8TBB1 728 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 TBC1D16Q8TBP0 767 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 CCHCR1Q8TD31 782 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 UBLCP1Q8WVY7 318 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 CCT6BQ92526 530 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 SEC16BQ96JE7 1060 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 ZNF317Q96PQ6 595 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 HS3ST6Q96QI5 342 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 XPO6Q96QU8 1125 aaKnown RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 PLCD4Q9BRC7 762 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 TRAIPQ9BWF2 469 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 STRA6Q9BX79 667 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 IDI2Q9BXS1 227 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 MOV10L1Q9BXT6 1211 aaKnown RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 ROPN1BQ9BZX4 212 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 NSRP1Q9H0G5 558 aaKnown RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 DDX47Q9H0S4 455 aaKnown RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 NEUROG2Q9H2A3 272 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 EPB41L4BQ9H329 900 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 ROPN1Q9HAT0 212 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 VAT1LQ9HCJ6 419 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC40A1Q9NP59 571 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 KCNQ5Q9NR82 932 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 KLC4Q9NSK0 619 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 APEX2Q9UBZ4 518 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 MTRF1LQ9UGC7 380 aaKnown RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 AMACRQ9UHK6 382 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 CCNL1Q9UK58 526 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 PACSIN2Q9UNF0 486 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 SLC12A4Q9UP95 1085 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 RABGAP1Q9Y3P9 1069 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 SAMM50Q9Y512 469 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 PCDHA1Q9Y5I3 950 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 KAT6BQ8WYB5 2073 aa5.68□□□□□ -1.5
TMEM55B-204ENST00000553602 IGLV3-22A0A075B6J6 115 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 A0A1B0GUA9 196 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 SPDYE3A6NKU9 549 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 GOLGA8CPA6NN73 597 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 O00370 1275 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 KIAA0391O15091 583 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TTI1O43156 1089 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 MGRN1O60291 552 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TCEA3O75764 348 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 GCNT3O95395 438 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 FGGP02679 453 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 BCRP11274 1271 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 RARGP13631 454 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 ATP5DP30049 168 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 HPDP32754 393 aaPredicted RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 RDXP35241 583 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 PDE6BP35913 854 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 MAP2K2P36507 400 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 SEC24CP53992 1094 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 PMS2P54278 862 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 MAGOHP61326 146 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 MYL7Q01449 175 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 ARID5AQ03989 594 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 PDE4CQ08493 712 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 VAC14Q08AM6 782 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 IFT88Q13099 833 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 PABPC4Q13310 644 aaKnown RBP eCLIP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 SNCBQ16143 134 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 PUS10Q3MIT2 529 aaKnown RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 ZNF568Q3ZCX4 644 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 DCAF17Q5H9S7 520 aaPredicted RBP5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 KIAA1755Q5JYT7 1200 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 TRAPPC3LQ5T215 181 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 C6orf118Q5T5N4 469 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 DCAF12L1Q5VU92 463 aa5.67□□□□□ -1.5
TMEM55B-204ENST00000553602 RINT1Q6NUQ1 792 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms