RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 PPP1R14CQ8TAE6 165 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 BICD2Q8TD16 824 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 KCNN1Q92952 543 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 SERINC2Q96SA4 455 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CORO1BQ9BR76 489 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 MYO1AQ9UBC5 1043 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 PRKAG3Q9UGI9 489 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ITGB1BP2Q9UKP3 347 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 TPCN1Q9ULQ1 816 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 FNDC3AQ9Y2H6 1198 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 TTLL3Q9Y4R7 772 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 COL1A1P02452 1464 aaPredicted RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 B4DLN1 442 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 TBCAO75347 108 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 HARSP12081 509 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 OSMP13725 252 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 HIRAP54198 1017 aaPredicted RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 CTSWP56202 376 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 MXRA7P84157 204 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 POU5F1BQ06416 359 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 SLC39A6Q13433 755 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 POSTNQ15063 836 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 PPP2R5BQ15173 497 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 SAFBQ15424 915 aaKnown RBP eCLIP4.37□□□□□ -1.71
RDH11-204ENST00000553578 GKAP1Q5VSY0 366 aaPredicted RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 CDCA2Q69YH5 1023 aaPredicted RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 ATL3Q6DD88 541 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 RUFY3Q7L099 469 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 MTDHQ86UE4 582 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 NXPE1Q8N323 547 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 SVOPQ8N4V2 548 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 LRRN4CLQ8ND94 238 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 OR8K1Q8NGG5 319 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 TMX3Q96JJ7 454 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 SPAG5Q96R06 1193 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 C12orf49Q9H741 205 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 SSX2IPQ9Y2D8 614 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 WDR37Q9Y2I8 494 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ARFGEF1Q9Y6D6 1849 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 GOLGA6L7A0A1B0GV03 622 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 METTL12A8MUP2 240 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 GAS7O60861 476 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 URI1O94763 535 aaPredicted RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 ADAMTS2O95450 1211 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 FESP07332 822 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CELA3AP09093 270 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CLTAP09496 248 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 PCP11498 1178 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 PSMC4P43686 418 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 SRSF11Q05519 484 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 DDR1Q08345 913 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CBX3Q13185 183 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 KRT32Q14532 448 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 TSHZ3Q63HK5 1081 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 THOC7Q6I9Y2 204 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 FAM169BQ8N8A8 192 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 KCNG4Q8TDN1 519 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ARMC5Q96C12 935 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 OSBPL7Q9BZF2 842 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CCDC68Q9H2F9 335 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 PLCB1Q9NQ66 1216 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ENAMQ9NRM1 1142 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 THG1LQ9NWX6 298 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 GALNT8Q9NY28 637 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CFAP45Q9UL16 551 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ASAP1Q9ULH1 1129 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 FAM237AA0A1B0GTK4 181 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 A0A1B0GVG6 124 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 TRIM64A6NGJ6 449 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 TRIM64BA6NI03 449 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 EIF4E1BA6NMX2 242 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 SURF6O75683 361 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 HNRNPCP07910 306 aaKnown RBP eCLIP4.37□□□□□ -1.71
RDH11-204ENST00000553578 CDC25CP30307 473 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 TM4SF1P30408 202 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 SLC8A1P32418 973 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ZNF131P52739 623 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 HDAC4P56524 1084 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ETF1P62495 437 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 CTAG1AP78358 180 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 SNW1Q13573 536 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 ZNF460Q14592 562 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ARSHQ5FYA8 562 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 TTBK2Q6IQ55 1244 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 PACS1Q6VY07 963 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CCDC50Q8IVM0 306 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ZZZ3Q8IYH5 903 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 MARK1Q9P0L2 795 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 BARX2Q9UMQ3 279 aaPredicted RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 SPO11Q9Y5K1 396 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 NOP56O00567 594 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 KPNA5O15131 536 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 BNIP3LO60238 219 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 HNRNPCL1O60812 293 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 RNASEH2AO75792 299 aaKnown RBP4.36□□□□□ -1.71
RDH11-204ENST00000553578 GJB6O95452 261 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 FAM157BP0CG42 384 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 FGFR1P11362 822 aa4.36□□□□□ -1.71
RDH11-204ENST00000553578 FUT4P22083 530 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms