RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 GPRASP2Q96D09 838 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 RPGRIP1Q96KN7 1286 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 PCYT2Q99447 389 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 FTHL17Q9BXU8 183 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 ERAP1Q9NZ08 941 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 PADI3Q9ULW8 664 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 TRPV2Q9Y5S1 764 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 EPG5Q9HCE0 2579 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 OTOGLQ3ZCN5 2332 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 FANCMQ8IYD8 2048 aa8.36□□□□□ -1.07
ATXN3-219ENST00000553488 PER2O15055 1255 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 MGEA5O60502 916 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 ATG7O95352 703 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 RPLP2P05387 115 aaKnown RBP8.35□□□□□ -1.07
ATXN3-219ENST00000553488 ARAFP10398 606 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 BMP4P12644 408 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 UBE3AQ05086 875 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 DIEXFQ68CQ4 756 aaKnown RBP8.35□□□□□ -1.07
ATXN3-219ENST00000553488 SYCE2Q6PIF2 218 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 TMEM184AQ6ZMB5 413 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 ASCL5Q7RTU5 278 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 SMC5Q8IY18 1101 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 GIMAP8Q8ND71 665 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-219ENST00000553488 FAM200AQ8TCP9 573 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 SEPT1Q8WYJ6 367 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 CDCA3Q99618 268 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-219ENST00000553488 HINFPQ9BQA5 517 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 FAM49AQ9H0Q0 323 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-219ENST00000553488 S1PR5Q9H228 398 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 TLE6Q9H808 572 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 AVENQ9NQS1 362 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-219ENST00000553488 TLR9Q9NR96 1032 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 DIAPH3Q9NSV4 1193 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 KLF15Q9UIH9 416 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 GDF2Q9UK05 429 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-219ENST00000553488 NOVA2Q9UNW9 492 aaKnown RBP8.35□□□□□ -1.07
ATXN3-219ENST00000553488 TAF6LQ9Y6J9 622 aa8.35□□□□□ -1.07
ATXN3-219ENST00000553488 TPRP12270 2363 aaKnown RBP8.35□□□□□ -1.07
ATXN3-219ENST00000553488 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-219ENST00000553488 FSD2A1L4K1 749 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 PRR23AA6NEV1 266 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 SHISA8B8ZZ34 492 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 H0Y858 1186 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 KHNYNO15037 678 aaKnown RBP8.34□□□□□ -1.07
ATXN3-219ENST00000553488 CYP21A2P08686 494 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 STAG3L1P0CL83 205 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 INSRRP14616 1297 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 NBL1P41271 181 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 SARSP49591 514 aaKnown RBP8.34□□□□□ -1.07
ATXN3-219ENST00000553488 ERVFC1P60507 584 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 IGBP1P78318 339 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 TMEM62Q0P6H9 643 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 PAK2Q13177 524 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 IER5Q5VY09 327 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 NLRX1Q86UT6 975 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 SMARCC2Q8TAQ2 1214 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 RASGRP4Q8TDF6 673 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 TRAPPC12Q8WVT3 735 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 ATOH1Q92858 354 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-219ENST00000553488 RIPOR3Q96MK2 946 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 NEK1Q96PY6 1258 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 SPZ1Q9BXG8 430 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 IRF2BPLQ9H1B7 796 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 SMARCAD1Q9H4L7 1026 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 ERVK-5Q9HDB9 667 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 ENAMQ9NRM1 1142 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 CDH22Q9UJ99 828 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 PCDHA2Q9Y5H9 948 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 UBIAD1Q9Y5Z9 338 aa8.34□□□□□ -1.07
ATXN3-219ENST00000553488 DOCK8Q8NF50 2099 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 RRN3P2A6NIE6 340 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 HIP1O00291 1037 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 FGF18O76093 207 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-219ENST00000553488 CD33P20138 364 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 ANTXR2P58335 489 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 MTMR1Q13613 665 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 PLCB4Q15147 1175 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 TMEM266Q2M3C6 531 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 ANKRD54Q6NXT1 300 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 TMEM105Q8N8V8 129 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 COLGALT1Q8NBJ5 622 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 TMEM40Q8WWA1 233 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 PIBF1Q8WXW3 757 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 GLG1Q92896 1179 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 CDHR1Q96JP9 859 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 SUSD3Q96L08 255 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 MDFIQ99750 246 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 CELF4Q9BZC1 486 aaKnown RBP8.33□□□□□ -1.08
ATXN3-219ENST00000553488 CWH43Q9H720 699 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 MARK1Q9P0L2 795 aa8.33□□□□□ -1.08
ATXN3-219ENST00000553488 KMT2BQ9UMN6 2715 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-219ENST00000553488 SPTBN2O15020 2390 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 SMIM35A0A1B0GVV1 85 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 TBKBP1A7MCY6 615 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 HIDE1A8MVS5 230 aa8.32□□□□□ -1.08
ATXN3-219ENST00000553488 C9IYK1 514 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms