RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 MICALL1Q8N3F8 863 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 KLHL23Q8NBE8 558 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 COLGALT1Q8NBJ5 622 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 SPPL3Q8TCT6 385 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 URGCPQ8TCY9 931 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 HELQQ8TDG4 1101 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 PPM1EQ8WY54 764 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 ZNF558Q96NG5 402 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 NTPCRQ9BSD7 190 aaKnown RBP9.15□□□□□ -0.94
PCNX1-204ENST00000553428 NSUN3Q9H649 340 aaKnown RBP9.15□□□□□ -0.94
PCNX1-204ENST00000553428 TMEM134Q9H6X4 195 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 RSAD1Q9HA92 442 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 STK17AQ9UEE5 414 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 STK39Q9UEW8 545 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 CCDC39Q9UFE4 941 aa9.15□□□□□ -0.94
PCNX1-204ENST00000553428 FBXO2Q9UK22 296 aaPredicted RBP9.15□□□□□ -0.94
PCNX1-204ENST00000553428 FSD2A1L4K1 749 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 H0YCG3 227 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 GRM6O15303 877 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 HIP1RO75146 1068 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 OFD1O75665 1012 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 YEATS4O95619 227 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 PRKCBP05771 671 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 PLA2G4BP0C869 781 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 ZSCAN22P10073 491 aaPredicted RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 ITGA4P13612 1032 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 ALDH7A1P49419 539 aaKnown RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 SLC12A3P55017 1021 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 MRPS5P82675 430 aaKnown RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 PLCB3Q01970 1234 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 KRT17Q04695 432 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 SKIV2LQ15477 1246 aaKnown RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 ZRSR1Q15695 479 aaKnown RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 KCNT2Q6UVM3 1135 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 AGMOQ6ZNB7 445 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 LRRC55Q6ZSA7 311 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 THNSL1Q8IYQ7 743 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 KRI1Q8N9T8 703 aaKnown RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 RASSF8Q8NHQ8 419 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 BSNDQ8WZ55 320 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 SYMPKQ92797 1274 aaKnown RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 KCNN1Q92952 543 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 HLA-CQ95604 372 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 CPB2Q96IY4 423 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 USP28Q96RU2 1077 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 ADPGKQ9BRR6 497 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 RUSC1Q9BVN2 902 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 TRIM6Q9C030 488 aaPredicted RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 CCDC113Q9H0I3 377 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 SPG21Q9NZD8 308 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 LARSQ9P2J5 1176 aaKnown RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 ARHGAP28Q9P2N2 729 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 PUF60Q9UHX1 559 aaKnown RBP9.14□□□□□ -0.95
PCNX1-204ENST00000553428 ODF2LQ9ULJ1 636 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 GIT1Q9Y2X7 761 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 IPPQ9Y573 584 aa9.14□□□□□ -0.95
PCNX1-204ENST00000553428 ARID2Q68CP9 1835 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 LAMA3Q16787 3333 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 CCDC169A6NNP5 214 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 K7ERI5 159 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 B4GALT5O43286 388 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 PPP6R2O75170 966 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 FGF18O76093 207 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 F13A1P00488 732 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 SSBP05455 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 PLS3P13797 630 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 PLCG1P19174 1290 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 MARCKSP29966 332 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 ABCD1P33897 745 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 DDIT3P35638 169 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 NPTX2P47972 431 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 SMTNP53814 917 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 RNASELQ05823 741 aaKnown RBP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 MAPK7Q13164 816 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 PRPF4BQ13523 1007 aaKnown RBP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 BMS1Q14692 1282 aaKnown RBP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 COL19A1Q14993 1142 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 TMEM132AQ24JP5 1023 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 DCAF4L1Q3SXM0 396 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 TJAP1Q5JTD0 557 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 FAM173BQ6P4H8 233 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 DAW1Q8N136 415 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 SLC39A11Q8N1S5 342 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 LINC00301Q8NCQ3 95 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 SMG8Q8ND04 991 aaKnown RBP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 POF1BQ8WVV4 589 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 MRPS27Q92552 414 aaKnown RBP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 LARP4BQ92615 738 aaKnown RBP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 RAD54LQ92698 747 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 LPPQ93052 612 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 TMEM175Q9BSA9 504 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 EIF2AQ9BY44 585 aaKnown RBP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 ALG13Q9NP73 1137 aaKnown RBP9.13□□□□□ -0.95
PCNX1-204ENST00000553428 KMT5AQ9NQR1 393 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 TLR9Q9NR96 1032 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 TBC1D13Q9NVG8 400 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 RALGAPA2Q2PPJ7 1873 aa9.13□□□□□ -0.95
PCNX1-204ENST00000553428 MYO9BQ13459 2157 aa9.12□□□□□ -0.95
PCNX1-204ENST00000553428 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms