RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 LRRC37BQ96QE4 947 aa6.83□□□□□ -1.32
ATXN3-218ENST00000553309 LMF1Q96S06 567 aa6.83□□□□□ -1.32
ATXN3-218ENST00000553309 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
ATXN3-218ENST00000553309 ST6GALNAC2Q9UJ37 374 aa6.83□□□□□ -1.32
ATXN3-218ENST00000553309 TNS3Q68CZ2 1445 aa6.83□□□□□ -1.32
ATXN3-218ENST00000553309 LRPPRCP42704 1394 aaKnown RBP6.82□□□□□ -1.32
ATXN3-218ENST00000553309 POU3F2P20265 443 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-218ENST00000553309 PTX3P26022 381 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-218ENST00000553309 SLC6A3Q01959 620 aa6.82□□□□□ -1.32
ATXN3-218ENST00000553309 TRIM68Q6AZZ1 485 aa6.82□□□□□ -1.32
ATXN3-218ENST00000553309 KRT28Q7Z3Y7 464 aa6.82□□□□□ -1.32
ATXN3-218ENST00000553309 NXPE1Q8N323 547 aa6.82□□□□□ -1.32
ATXN3-218ENST00000553309 DNAJC5GQ8N7S2 189 aa6.82□□□□□ -1.32
ATXN3-218ENST00000553309 GNRHR2Q96P88 292 aa6.82□□□□□ -1.32
ATXN3-218ENST00000553309 GPR20Q99678 358 aa6.82□□□□□ -1.32
ATXN3-218ENST00000553309 FOXB1Q99853 325 aa6.82□□□□□ -1.32
ATXN3-218ENST00000553309 ORAI3Q9BRQ5 295 aa6.82□□□□□ -1.32
ATXN3-218ENST00000553309 NEXMIFQ5QGS0 1516 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 ATP2A2P16615 1042 aaKnown RBP6.81□□□□□ -1.32
ATXN3-218ENST00000553309 MEOX1P50221 254 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 RAC3P60763 192 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 ADAM17P78536 824 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 ROM1Q03395 351 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 ICAM4Q14773 271 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 PCOLCEQ15113 449 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 DALRD3Q5D0E6 543 aaKnown RBP6.81□□□□□ -1.32
ATXN3-218ENST00000553309 TMEM200BQ69YZ2 307 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 FILIP1Q7Z7B0 1213 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 TAX1BP1Q86VP1 789 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 RTKN2Q8IZC4 609 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 TTC9BQ8N6N2 239 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 NEIL1Q96FI4 390 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-218ENST00000553309 MAML3Q96JK9 1138 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 C16orf92Q96LL3 132 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 ELF4Q99607 663 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-218ENST00000553309 FEZ1Q99689 392 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 MEGF9Q9H1U4 602 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 OXSMQ9NWU1 459 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 NR2E1Q9Y466 385 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 CCDC144AA2RUR9 1427 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 ABCC5O15440 1437 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 CROCC2H7BZ55 1655 aa6.81□□□□□ -1.32
ATXN3-218ENST00000553309 TECPR2O15040 1411 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 GAS7O60861 476 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 F2P00734 622 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 RGS3P49796 1198 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 MRE11P49959 708 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 STAT5BP51692 787 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 PCBP1Q15365 356 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATXN3-218ENST00000553309 TBR1Q16650 682 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 MYOM3Q5VTT5 1437 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 CDC42BPGQ6DT37 1551 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 USP30Q70CQ3 517 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 NME9Q86XW9 330 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 GIMAP8Q8ND71 665 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-218ENST00000553309 TUBGCP5Q96RT8 1024 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 KIAA1683Q9H0B3 1180 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 DEF6Q9H4E7 631 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 TOMM22Q9NS69 142 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-218ENST00000553309 SPO11Q9Y5K1 396 aa6.8□□□□□ -1.32
ATXN3-218ENST00000553309 SPATA31A1Q5TZJ5 1347 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 UBA6A0AVT1 1052 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-218ENST00000553309 ZNF891A8MT65 544 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-218ENST00000553309 MAP3K12Q12852 859 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 EPHA7Q15375 998 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 TTC38Q5R3I4 469 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 SLFN12LQ6IEE8 588 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 PTF1AQ7RTS3 328 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 KIAA0907Q7Z7F0 614 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-218ENST00000553309 AHI1Q8N157 1196 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 DNERQ8NFT8 737 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 C12orf65Q9H3J6 166 aaKnown RBP6.79□□□□□ -1.32
ATXN3-218ENST00000553309 MAGEL2Q9UJ55 1249 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 FAM184BQ9ULE4 1060 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 PLAAQ9Y263 795 aa6.79□□□□□ -1.32
ATXN3-218ENST00000553309 NAIPQ13075 1403 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 COL14A1Q05707 1796 aaKnown RBP6.78□□□□□ -1.32
ATXN3-218ENST00000553309 ARHGAP6O43182 974 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 ZNF623O75123 536 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 PRLP01236 227 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 INSRRP14616 1297 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 CR2P20023 1033 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 SCNN1BP51168 640 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 ADCY1Q08828 1119 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 AGBL4Q5VU57 503 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 CREB3L3Q68CJ9 461 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 TCTN3Q6NUS6 607 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 DBX2Q6ZNG2 339 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 CHTF18Q8WVB6 975 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 MFSD3Q96ES6 412 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
ATXN3-218ENST00000553309 OR10A2Q9H208 303 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 CD248Q9HCU0 757 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 THG1LQ9NWX6 298 aaKnown RBP6.78□□□□□ -1.32
ATXN3-218ENST00000553309 STK32BQ9NY57 414 aa6.78□□□□□ -1.32
ATXN3-218ENST00000553309 SAE1Q9UBE0 346 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-218ENST00000553309 MAP3K5Q99683 1374 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms