RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 Q6ZUG5 572 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 ANO5Q75V66 913 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 TAS1R1Q7RTX1 841 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 CMASQ8NFW8 434 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-209ENST00000553308 KCNG4Q8TDN1 519 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 TBCKQ8TEA7 893 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 RIN2Q8WYP3 895 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-209ENST00000553308 RMDN1Q96DB5 314 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 FAM193BQ96PV7 902 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-209ENST00000553308 MYADMQ96S97 322 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 TMEM175Q9BSA9 504 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 HERC2P3Q9BVR0 1158 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 SLC26A6Q9BXS9 759 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 MINDY3Q9H8M7 445 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 TBC1D17Q9HA65 648 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 WNT16Q9UBV4 365 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 CA14Q9ULX7 337 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 FAN1Q9Y2M0 1017 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 PRG3Q9Y2Y8 225 aaPredicted RBP10.19□□□□□ -0.78
SYNE2-209ENST00000553308 R4GN57 208 aa10.19□□□□□ -0.78
SYNE2-209ENST00000553308 CCDC195A0A1B0GUA6 201 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 MED19A0JLT2 244 aaPredicted RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 F8W810 466 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 RFPL2O75678 378 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 GLUD1P00367 558 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 LMNAP02545 664 aaKnown RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 SOD2P04179 222 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 ALDH2P05091 517 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 ADH1AP07327 375 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 HMGB1P09429 215 aaKnown RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 RFX1P22670 979 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 NPEPPSP55786 919 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 Q4G0T1 1027 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 MRPL10Q7Z7H8 261 aaKnown RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 KIAA2013Q8IYS2 634 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 SLC44A3Q8N4M1 653 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 ZNF579Q8NAF0 562 aaKnown RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 ETNPPLQ8TBG4 499 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 SMG7Q92540 1137 aaKnown RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 RPS6KC1Q96S38 1066 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 RNF26Q9BY78 433 aaPredicted RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 NCOA5Q9HCD5 579 aaKnown RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 WDR6Q9NNW5 1121 aaKnown RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 BMP2KQ9NSY1 1161 aaPredicted RBP10.18□□□□□ -0.78
SYNE2-209ENST00000553308 EPS15L1Q9UBC2 864 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 STK39Q9UEW8 545 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 COL4A3BPQ9Y5P4 624 aa10.18□□□□□ -0.78
SYNE2-209ENST00000553308 GVINP1Q7Z2Y8 2422 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 CNTNAP2Q9UHC6 1331 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 EML1O00423 815 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 DCNP07585 359 aaKnown RBP10.17□□□□□ -0.78
SYNE2-209ENST00000553308 SPATA31D3P0C874 917 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 SRFP11831 508 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 HOXA11P31270 313 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-209ENST00000553308 GLUD2P49448 558 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 NLRP5P59047 1200 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 PSMC5P62195 406 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 BMP2KLQ5H9B9 411 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 SPATA31D4Q6ZUB0 917 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 COLGALT2Q8IYK4 626 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 RNF168Q8IYW5 571 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-209ENST00000553308 SMG8Q8ND04 991 aaKnown RBP10.17□□□□□ -0.78
SYNE2-209ENST00000553308 ST13P5Q8NFI4 369 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-209ENST00000553308 GPR152Q8TDT2 470 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 STAMQ92783 540 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 TMEM143Q96AN5 459 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 ZNF707Q96C28 371 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-209ENST00000553308 JAKMIP1Q96N16 626 aaKnown RBP10.17□□□□□ -0.78
SYNE2-209ENST00000553308 KANSL3Q9P2N6 904 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
SYNE2-209ENST00000553308 DCHS1Q96JQ0 3298 aa10.17□□□□□ -0.78
SYNE2-209ENST00000553308 DOCK8Q8NF50 2099 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 COL4A3Q01955 1670 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 CYP3A7-CYP3A51PA0A087WV96 503 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 SLC37A4O43826 429 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 EFEMP2O95967 443 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 SRGAP2CP0DJJ0 459 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 IFNAR1P17181 557 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 NCLP19338 710 aaKnown RBP10.16□□□□□ -0.78
SYNE2-209ENST00000553308 CYP3A7P24462 503 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 MLH1P40692 756 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 OR1G1P47890 313 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 CCT2P78371 535 aaKnown RBP10.16□□□□□ -0.78
SYNE2-209ENST00000553308 DSC1Q08554 894 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 NONOQ15233 471 aaKnown RBP eCLIP10.16□□□□□ -0.78
SYNE2-209ENST00000553308 KIAA0319Q5VV43 1072 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 BLOC1S2Q6QNY1 142 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 POTEGQ6S5H5 508 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 CYP26C1Q6V0L0 522 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 GET4Q7L5D6 327 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-209ENST00000553308 SRGAP1Q7Z6B7 1085 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 GLYCTKQ8IVS8 523 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 PRPF31Q8WWY3 499 aaKnown RBP10.16□□□□□ -0.78
SYNE2-209ENST00000553308 PSPC1Q8WXF1 523 aaKnown RBP10.16□□□□□ -0.78
SYNE2-209ENST00000553308 SLC7A3Q8WY07 619 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 B3GALT6Q96L58 329 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 ZFP42Q96MM3 310 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 MBOAT7Q96N66 472 aa10.16□□□□□ -0.78
SYNE2-209ENST00000553308 GAD1Q99259 594 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms