RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 A0A1B0GTH6 734 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 SSU72P8A0A1W2PR75 194 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 TTLL4Q14679 1199 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 FAM84BQ96KN1 310 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-208ENST00000553289 DNAJC17Q9NVM6 304 aaKnown RBP12.28□□□□□ -0.44
SYNE2-208ENST00000553289 STOML1Q9UBI4 398 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 ZFP69BQ9UJL9 534 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 MADDQ8WXG6 1647 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 TBX3O15119 743 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 EFNA5P52803 228 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 COPS2P61201 443 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 RWDD4Q6NW29 188 aaKnown RBP12.28□□□□□ -0.44
SYNE2-208ENST00000553289 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 SLC44A5Q8NCS7 719 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 HEMGNQ9BXL5 484 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 EIF2AQ9BY44 585 aaKnown RBP12.28□□□□□ -0.44
SYNE2-208ENST00000553289 KCND2Q9NZV8 630 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 ADGRB3O60242 1522 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 CFLARO15519 480 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 TSPY1Q01534 308 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 KCNV1Q6PIU1 500 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 ATG9AQ7Z3C6 839 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 COG1Q8WTW3 980 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 PARVAQ9NVD7 372 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 CFAP73A6NFT4 308 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 HAUS5O94927 633 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 YWHAHQ04917 246 aaPredicted RBP12.28□□□□□ -0.44
SYNE2-208ENST00000553289 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
SYNE2-208ENST00000553289 TRIM59Q8IWR1 403 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 CHMP6Q96FZ7 201 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 ACAP3Q96P50 834 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 KIFC3Q9BVG8 833 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 ACAD9Q9H845 621 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 NDE1Q9NXR1 346 aa12.28□□□□□ -0.44
SYNE2-208ENST00000553289 C7orf25Q9BPX7 421 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 FAM49AQ9H0Q0 323 aaPredicted RBP12.27□□□□□ -0.44
SYNE2-208ENST00000553289 VIPAS39Q9H9C1 493 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 GABBR1Q9UBS5 961 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 MAGED2Q9UNF1 606 aaPredicted RBP12.27□□□□□ -0.44
SYNE2-208ENST00000553289 MORC2Q9Y6X9 1032 aaPredicted RBP12.27□□□□□ -0.44
SYNE2-208ENST00000553289 PDS5AQ29RF7 1337 aaKnown RBP12.27□□□□□ -0.44
SYNE2-208ENST00000553289 TDP2O95551 362 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 ARPP19P56211 112 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 PSMC1P62191 440 aaKnown RBP12.27□□□□□ -0.44
SYNE2-208ENST00000553289 ZBTB17Q13105 803 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 SLC12A1Q13621 1099 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 HEATR6Q6AI08 1181 aaKnown RBP12.27□□□□□ -0.44
SYNE2-208ENST00000553289 CCDC137Q6PK04 289 aaKnown RBP12.27□□□□□ -0.44
SYNE2-208ENST00000553289 FSD1LQ9BXM9 530 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 TRIM9Q9C026 710 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 POLR3FQ9H1D9 316 aaPredicted RBP12.27□□□□□ -0.44
SYNE2-208ENST00000553289 AXIN2Q9Y2T1 843 aa12.27□□□□□ -0.44
SYNE2-208ENST00000553289 M0QYV0 167 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 MYO1CO00159 1063 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 RTN2O75298 545 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 KRT14P02533 472 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 SLC4A1P02730 911 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 BRAFP15056 766 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 ZNF394Q53GI3 561 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 DACT3Q96B18 629 aaPredicted RBP12.27□□□□□ -0.45
SYNE2-208ENST00000553289 DDX47Q9H0S4 455 aaKnown RBP12.27□□□□□ -0.45
SYNE2-208ENST00000553289 C21orf2O43822 256 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 CACNB3P54284 484 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 ROR1Q01973 937 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 STAT4Q14765 748 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 GRAMD1BQ3KR37 738 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 LRRC37BQ96QE4 947 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 CPVLQ9H3G5 476 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 PCDHA10Q9Y5I2 948 aa12.27□□□□□ -0.45
SYNE2-208ENST00000553289 BCORL1Q5H9F3 1711 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 CRB1P82279 1406 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 DRP2Q13474 957 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 KIAA1755Q5JYT7 1200 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 ELOA2Q8IYF1 753 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-208ENST00000553289 AGPAT1Q99943 283 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 MRPL46Q9H2W6 279 aaKnown RBP12.26□□□□□ -0.45
SYNE2-208ENST00000553289 SLC9A2Q9UBY0 812 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 ZHX2Q9Y6X8 837 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 PFDN1O60925 122 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 TRPA1O75762 1119 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 RHOBTB3O94955 611 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 SRGNP10124 158 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 KIF19Q2TAC6 998 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 BEND6Q5SZJ8 279 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-208ENST00000553289 STOX1Q6ZVD7 989 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 HAUS6Q7Z4H7 955 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 NLRP14Q86W24 1093 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 PASD1Q8IV76 773 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 ADSSL1Q8N142 457 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 SPATA4Q8NEY3 305 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 TTC8Q8TAM2 541 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
SYNE2-208ENST00000553289 UVRAGQ9P2Y5 699 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 SNX12Q9UMY4 172 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 EMSYQ7Z589 1322 aa12.26□□□□□ -0.45
SYNE2-208ENST00000553289 BCAR1P56945 870 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms