RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 LSM14BQ9BX40 385 aaKnown RBP13.38□□□□□ -0.27
SNRPF-205ENST00000553192 CHMP4BQ9H444 224 aaKnown RBP13.38□□□□□ -0.27
SNRPF-205ENST00000553192 PLEKHA4Q9H4M7 779 aa13.38□□□□□ -0.27
SNRPF-205ENST00000553192 AGO4Q9HCK5 861 aaKnown RBP13.38□□□□□ -0.27
SNRPF-205ENST00000553192 HEBP1Q9NRV9 189 aa13.38□□□□□ -0.27
SNRPF-205ENST00000553192 MARCH5Q9NX47 278 aa13.38□□□□□ -0.27
SNRPF-205ENST00000553192 DACT1Q9NYF0 836 aa13.38□□□□□ -0.27
SNRPF-205ENST00000553192 STK39Q9UEW8 545 aa13.38□□□□□ -0.27
SNRPF-205ENST00000553192 WDFY3Q8IZQ1 3526 aa13.38□□□□□ -0.27
SNRPF-205ENST00000553192 TMEM8BA6NDV4 472 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 NRP1O14786 923 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 GPC3P51654 580 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 STPG1Q5TH74 334 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 PSAPL1Q6NUJ1 521 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 PDXDC2PQ6P474 469 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 ELMSAN1Q6PJG2 1045 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 ZNF852Q6ZMS4 543 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 MTSS1LQ765P7 747 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.37□□□□□ -0.27
SNRPF-205ENST00000553192 GRASPQ7Z6J2 395 aaPredicted RBP13.37□□□□□ -0.27
SNRPF-205ENST00000553192 LRRC71Q8N4P6 559 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 FAM160A2Q8N612 972 aaPredicted RBP13.37□□□□□ -0.27
SNRPF-205ENST00000553192 ADAM33Q9BZ11 813 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 ZNF302Q9NR11 478 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 AKT3Q9Y243 479 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
SNRPF-205ENST00000553192 AKAP13Q12802 2813 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 DMXL2Q8TDJ6 3036 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 DOCK6Q96HP0 2047 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 CHURC1-FNTBB4DL54 471 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 GIPC1O14908 333 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 GAS2O43903 313 aaKnown RBP13.36□□□□□ -0.27
SNRPF-205ENST00000553192 ZMYND10O75800 440 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 FNTBP49356 437 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 SATB1Q01826 763 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 FOXC1Q12948 553 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 GAS6Q14393 721 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 CCDC6Q16204 474 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 FAM160B1Q5W0V3 765 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 SWSAP1Q6NVH7 229 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 EFCAB12Q6NXP0 572 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 TRMT1LQ7Z2T5 733 aaKnown RBP13.36□□□□□ -0.27
SNRPF-205ENST00000553192 PHF20Q9BVI0 1012 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 KRT23Q9C075 422 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 FAN1Q9Y2M0 1017 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 ITPR1Q14643 2758 aa13.36□□□□□ -0.27
SNRPF-205ENST00000553192 CYSRT1A8MQ03 144 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 DDX39AO00148 427 aaKnown RBP13.35□□□□□ -0.27
SNRPF-205ENST00000553192 ZNF623O75123 536 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 C1RP00736 705 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 ALDH2P05091 517 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 HOXC13P31276 330 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 GLUD2P49448 558 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 C20orf194Q5TEA3 1177 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 POTEHQ6S545 545 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 AGMOQ6ZNB7 445 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 ITFG1Q8TB96 612 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 TMEM175Q9BSA9 504 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 PLA2G2FQ9BZM2 168 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 CHST12Q9NRB3 414 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 FAM105AQ9NUU6 356 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 NDRG2Q9UN36 371 aaKnown RBP13.35□□□□□ -0.27
SNRPF-205ENST00000553192 MRPS17Q9Y2R5 130 aaKnown RBP13.35□□□□□ -0.27
SNRPF-205ENST00000553192 MAFBQ9Y5Q3 323 aaPredicted RBP13.35□□□□□ -0.27
SNRPF-205ENST00000553192 HELZ2Q9BYK8 2649 aaKnown RBP13.35□□□□□ -0.27
SNRPF-205ENST00000553192 F5P12259 2224 aa13.35□□□□□ -0.27
SNRPF-205ENST00000553192 F8W810 466 aa13.34□□□□□ -0.27
SNRPF-205ENST00000553192 MAGEB2O15479 319 aa13.34□□□□□ -0.27
SNRPF-205ENST00000553192 DHX15O43143 795 aaKnown RBP13.34□□□□□ -0.27
SNRPF-205ENST00000553192 ZNF806P0C7X5 589 aa13.34□□□□□ -0.27
SNRPF-205ENST00000553192 CCR3P51677 355 aa13.34□□□□□ -0.27
SNRPF-205ENST00000553192 DSG1Q02413 1049 aa13.34□□□□□ -0.27
SNRPF-205ENST00000553192 ZCCHC14Q8WYQ9 949 aaKnown RBP13.34□□□□□ -0.27
SNRPF-205ENST00000553192 MAP7D2Q96T17 732 aa13.34□□□□□ -0.27
SNRPF-205ENST00000553192 CHST7Q9NS84 486 aa13.34□□□□□ -0.27
SNRPF-205ENST00000553192 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
SNRPF-205ENST00000553192 PRG3Q9Y2Y8 225 aaPredicted RBP13.34□□□□□ -0.27
SNRPF-205ENST00000553192 LOC400499M0QZD8 3231 aa13.34□□□□□ -0.27
SNRPF-205ENST00000553192 SPDYE3A6NKU9 549 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 K7ESF4 209 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 AXIN1O15169 862 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 RPL17P18621 184 aaKnown RBP13.33□□□□□ -0.28
SNRPF-205ENST00000553192 CNR2P34972 360 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 CXCL12P48061 93 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 DRP2Q13474 957 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 TWF2Q6IBS0 349 aaKnown RBP13.33□□□□□ -0.28
SNRPF-205ENST00000553192 TICAM2Q86XR7 235 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 GLYCTKQ8IVS8 523 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 C12orf50Q8NA57 414 aaPredicted RBP13.33□□□□□ -0.28
SNRPF-205ENST00000553192 B3GALT6Q96L58 329 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 MBOAT7Q96N66 472 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 SPZ1Q9BXG8 430 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 ARRDC1-AS1Q9H2J1 176 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 CNNM2Q9H8M5 875 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 LMAN1LQ9HAT1 526 aa13.33□□□□□ -0.28
SNRPF-205ENST00000553192 LY9Q9HBG7 655 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms