RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 GPAA1O43292 621 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 DHX16O60231 1041 aaKnown RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 SMARCA5O60264 1052 aaPredicted RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 NMT2O60551 498 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 RAB11FIP3O75154 756 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 FGFR1P11362 822 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 CEACAM1P13688 526 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 INSRRP14616 1297 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 ERCC5P28715 1186 aaPredicted RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 MMP16P51512 607 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 NOVA1P51513 510 aaKnown RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 HSD17B4P51659 736 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 IGBP1P78318 339 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 FGD1P98174 961 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 MTAPQ13126 283 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 PGM5Q15124 567 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 CDC37Q16543 378 aaPredicted RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 CCDC178Q5BJE1 867 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 MARCH8Q5T0T0 291 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 RNF20Q5VTR2 975 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 PSAPL1Q6NUJ1 521 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 LRRC55Q6ZSA7 311 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 MTSS1LQ765P7 747 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 NLRX1Q86UT6 975 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 FAM9BQ8IZU0 186 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 TPCN2Q8NHX9 752 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 SMG7Q92540 1137 aaKnown RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 FRAT1Q92837 279 aaPredicted RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 ZFRQ96KR1 1074 aaKnown RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 ARHGAP9Q9BRR9 750 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 SCNM1Q9BWG6 230 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 AMNQ9BXJ7 453 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 ZBP1Q9H171 429 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 PLEKHA4Q9H4M7 779 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 AZI2Q9H6S1 392 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 ANO2Q9NQ90 1003 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 PRMT8Q9NR22 394 aaPredicted RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 MRPL17Q9NRX2 175 aaKnown RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 TOMM22Q9NS69 142 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 SEPT3Q9UH03 358 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 GINS2Q9Y248 185 aa5.93□□□□□ -1.46
CKAP4-203ENST00000553039 SUPT16HQ9Y5B9 1047 aaKnown RBP5.93□□□□□ -1.46
CKAP4-203ENST00000553039 SFI1A8K8P3 1242 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 GCOM1H8Y6P7 765 aaPredicted RBP5.92□□□□□ -1.46
CKAP4-203ENST00000553039 AXIN1O15169 862 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 FIBPO43427 364 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 HRO43593 1189 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 GAS2O43903 313 aaKnown RBP5.92□□□□□ -1.46
CKAP4-203ENST00000553039 N4BP1O75113 896 aaKnown RBP5.92□□□□□ -1.46
CKAP4-203ENST00000553039 NR1I2O75469 434 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 ALDH2P05091 517 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 POLR2MP0CAP2 368 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 TRIM27P14373 513 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 TCF7P36402 384 aaPredicted RBP5.92□□□□□ -1.46
CKAP4-203ENST00000553039 METAP2P50579 478 aaKnown RBP eCLIP5.92□□□□□ -1.46
CKAP4-203ENST00000553039 CLCN4P51793 760 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 BCAR1P56945 870 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 RAD51AP2Q09MP3 1159 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 TMEM62Q0P6H9 643 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 HTR4Q13639 388 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 TMEM266Q2M3C6 531 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 RNF43Q68DV7 783 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 POTEHQ6S545 545 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 LONP2Q86WA8 852 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 LURAP1LQ8IV03 231 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 ADGRF4Q8IZF3 695 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 HELQQ8TDG4 1101 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 GATA6Q92908 595 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 OSBP2Q969R2 916 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 IGSF21Q96ID5 467 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 CDHR1Q96JP9 859 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 CITED4Q96RK1 184 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 UBA5Q9GZZ9 404 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 VAT1LQ9HCJ6 419 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 MSRB2Q9Y3D2 182 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 NOC2LQ9Y3T9 749 aaKnown RBP5.92□□□□□ -1.46
CKAP4-203ENST00000553039 NEUROG3Q9Y4Z2 214 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 NUMBLQ9Y6R0 609 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 ASXL3Q9C0F0 2248 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 CLUHO75153 1309 aa5.92□□□□□ -1.46
CKAP4-203ENST00000553039 HELZ2Q9BYK8 2649 aaKnown RBP5.91□□□□□ -1.46
CKAP4-203ENST00000553039 NT5C1B-RDH14C9J2C7 533 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 TK2O00142 265 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 INPPL1O15357 1258 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 MAFGO15525 162 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 ORC4O43929 436 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 RNF40O75150 1001 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 HMMRO75330 724 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 FAM13AO94988 1023 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 ADH1AP07327 375 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 CNPP09543 421 aaKnown RBP5.91□□□□□ -1.46
CKAP4-203ENST00000553039 SNHG28P0DPA3 235 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 CSRP1P21291 193 aaKnown RBP5.91□□□□□ -1.46
CKAP4-203ENST00000553039 CD72P21854 359 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 FSHRP23945 695 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 PBX3P40426 434 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 CRYBB1P53674 252 aaPredicted RBP5.91□□□□□ -1.46
CKAP4-203ENST00000553039 SP4Q02446 784 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 GHRHRQ02643 423 aa5.91□□□□□ -1.46
CKAP4-203ENST00000553039 ZNF252P-AS1Q0IIN9 211 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms