RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ABHD15Q6UXT9 468 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 CCDC73Q6ZRK6 1079 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 SLC24A5Q71RS6 500 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 OTUD6AQ7L8S5 288 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 PLPPR4Q7Z2D5 763 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 CCDC60Q8IWA6 550 aaPredicted RBP12.64□□□□□ -0.39
TMEM116-218ENST00000552839 IGSF22Q8N9C0 903 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 KREMEN2Q8NCW0 462 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 TMEM40Q8WWA1 233 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 CCDC34Q96HJ3 373 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 CLIC6Q96NY7 704 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 TUFT1Q9NNX1 390 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 NRBP2Q9NSY0 501 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 RCOR1Q9UKL0 485 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 GINS2Q9Y248 185 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 LZTS1Q9Y250 596 aa12.64□□□□□ -0.39
TMEM116-218ENST00000552839 MORC2Q9Y6X9 1032 aaPredicted RBP12.64□□□□□ -0.39
TMEM116-218ENST00000552839 TCHHQ07283 1943 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 DENND3A2RUS2 1198 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 PRR23AA6NEV1 266 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 DDX11L8A8MPP1 907 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 PP2D1A8MPX8 630 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 HIDE1A8MVS5 230 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 RPS6KA5O75582 802 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 OATP04181 439 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 SSBP05455 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
TMEM116-218ENST00000552839 SRGAP2BP0DMP2 458 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 FGFR1P11362 822 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 KLRC1P26715 233 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 NBL1P41271 181 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 PLCB3Q01970 1234 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 SPECC1Q5M775 1068 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 TMEM105Q8N8V8 129 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 MRPS27Q92552 414 aaKnown RBP12.63□□□□□ -0.39
TMEM116-218ENST00000552839 TCF25Q9BQ70 676 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 PYM1Q9BRP8 204 aaKnown RBP12.63□□□□□ -0.39
TMEM116-218ENST00000552839 POLR3CQ9BUI4 534 aaPredicted RBP12.63□□□□□ -0.39
TMEM116-218ENST00000552839 SMOC2Q9H3U7 446 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 POMKQ9H5K3 350 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 C1orf112Q9NSG2 853 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 PCDHA7Q9UN72 937 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 ST3GAL5Q9UNP4 418 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 SORCS3Q9UPU3 1222 aa12.63□□□□□ -0.39
TMEM116-218ENST00000552839 ARHGEF35A5YM69 484 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 C2CD4DB7Z1M9 353 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 SLC26A4O43511 780 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 ATG7O95352 703 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 HOXB8P17481 243 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-218ENST00000552839 LAG3P18627 525 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 RPA1P27694 616 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 CDC25AP30304 524 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 STAT6P42226 847 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 SPIRE1Q08AE8 756 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 MTERF2Q49AM1 385 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 XKR3Q5GH77 459 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 RRAGBQ5VZM2 374 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 POTEGQ6S5H5 508 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 LRRC55Q6ZSA7 311 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 UBALD2Q8IYN6 164 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 KIAA0319LQ8IZA0 1049 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 FSIP1Q8NA03 581 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
TMEM116-218ENST00000552839 NACC1Q96RE7 527 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 PLIN2Q99541 437 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 ENTPD7Q9NQZ7 604 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
TMEM116-218ENST00000552839 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-218ENST00000552839 RGL1Q9NZL6 768 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 PUF60Q9UHX1 559 aaKnown RBP12.62□□□□□ -0.39
TMEM116-218ENST00000552839 KIAA1024Q9UPX6 916 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 DNM3Q9UQ16 869 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 NR2E1Q9Y466 385 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 WDR81Q562E7 1941 aa12.62□□□□□ -0.39
TMEM116-218ENST00000552839 GPR182O15218 404 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 HBP1O60381 514 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 MED24O75448 989 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 KRT18P05783 430 aaKnown RBP12.61□□□□□ -0.39
TMEM116-218ENST00000552839 MUTP22033 750 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 YWHABP31946 246 aaKnown RBP12.61□□□□□ -0.39
TMEM116-218ENST00000552839 FAM189BP81408 668 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 GRIN1Q05586 938 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 MTMR3Q13615 1198 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 KARSQ15046 597 aaKnown RBP12.61□□□□□ -0.39
TMEM116-218ENST00000552839 IL17AQ16552 155 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 UGCGQ16739 394 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 XKR9Q5GH70 373 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 ODR4Q5SWX8 454 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 ADALQ6DHV7 355 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 FAM43BQ6ZT52 329 aaPredicted RBP12.61□□□□□ -0.39
TMEM116-218ENST00000552839 FAM228AQ86W67 206 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 CEP57L1Q8IYX8 460 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 PDILTQ8N807 584 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
TMEM116-218ENST00000552839 CEP170P1Q96L14 293 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 CASD1Q96PB1 797 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 PPP1R16BQ96T49 567 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 ELAC1Q9H777 363 aaKnown RBP12.61□□□□□ -0.39
TMEM116-218ENST00000552839 ATP6V0A4Q9HBG4 840 aa12.61□□□□□ -0.39
TMEM116-218ENST00000552839 NGRNQ9NPE2 291 aaKnown RBP12.61□□□□□ -0.39
TMEM116-218ENST00000552839 RNF19AQ9NV58 838 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms