RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CAPS2Q9BXY5 557 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 AGPAT3Q9NRZ7 376 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 INTS8Q75QN2 995 aaKnown RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 MTMR8Q96EF0 704 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 TBC1D22BQ9NU19 505 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 STIM2Q9P246 746 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 FBXO40Q9UH90 709 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 NOC2LQ9Y3T9 749 aaKnown RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 COL1A1P02452 1464 aaPredicted RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 SGPL1O95470 568 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 OSBPP22059 807 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 DR1Q01658 176 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 IFT88Q13099 833 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 LLGL2Q6P1M3 1020 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 TXNDC16Q9P2K2 825 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 PLAAQ9Y263 795 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 TMX2Q9Y320 296 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 CCDC151A5D8V7 595 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 ACTR2P61160 394 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 YWHAGP61981 247 aaKnown RBP eCLIP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 TWF2Q6IBS0 349 aaKnown RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 SMAP1Q8IYB5 467 aaPredicted RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 UBA3Q8TBC4 463 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 ZNF564Q8TBZ8 553 aaPredicted RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 SYTL5Q8TDW5 730 aaPredicted RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 MED15Q96RN5 788 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 SPON1Q9HCB6 807 aa11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 G3BP2Q9UN86 482 aaKnown RBP11.58□□□□□ -0.56
TGFBR1-209ENST00000552516 PIAS1O75925 651 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 ZNF286BP0CG31 522 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 PPATQ06203 517 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 BBS9Q3SYG4 887 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 CCDC97Q96F63 343 aaPredicted RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 WNK4Q96J92 1243 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 NAP1L3Q99457 506 aaPredicted RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 RPF1Q9H9Y2 349 aaKnown RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 RAP1GAPP47736 663 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 ZNF699Q32M78 642 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 CDKAL1Q5VV42 579 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 LRRC45Q96CN5 670 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 TMEM117Q9H0C3 514 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 EFCC1Q9HA90 598 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 SMYD2Q9NRG4 433 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 SUGT1Q9Y2Z0 365 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 FAM169AQ9Y6X4 670 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 SDK1Q7Z5N4 2213 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 EIF4E1BA6NMX2 242 aaKnown RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 EIF3CLB5ME19 914 aaKnown RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 GAS8O95995 478 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 GNA15P30679 374 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 CIITAP33076 1130 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 TCF7P36402 384 aaPredicted RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 HNRNPH2P55795 449 aaKnown RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 ITKQ08881 620 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 TMED2Q15363 201 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 KCNT1Q5JUK3 1230 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 KIAA1755Q5JYT7 1200 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 MMS22LQ6ZRQ5 1243 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 TAS1R2Q8TE23 839 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 PSPC1Q8WXF1 523 aaKnown RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 ANKRD36BP1Q96IX9 119 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 EIF3CQ99613 913 aaKnown RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 WDR46O15213 610 aaKnown RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 ATF2P15336 505 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 PON1P27169 355 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 KRT76Q01546 638 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 SYT2Q8N9I0 419 aaPredicted RBP11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 ZSWIM2Q8NEG5 633 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 TATDN2Q93075 761 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 CPB2Q96IY4 423 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 HESX1Q9UBX0 185 aa11.57□□□□□ -0.56
TGFBR1-209ENST00000552516 SOX5P35711 763 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 GUCY1A3Q02108 690 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 NPY5RQ15761 445 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 FAM117BQ6P1L5 589 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 PALM2Q8IXS6 379 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 NKIRAS1Q9NYS0 192 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 GOLGA8RI6L899 631 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 BNIP3LO60238 219 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 RNF8O76064 485 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 MMEP08473 750 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 PPM1FP49593 454 aaPredicted RBP11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 EP400NLQ6ZTU2 488 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 SLC47A2Q86VL8 602 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 CCDC13Q8IYE1 715 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 HOXA10P31260 410 aaPredicted RBP11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 KIZQ2M2Z5 673 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 PRAMEF19Q5SWL8 479 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 TRIM65Q6PJ69 517 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 FAM47EQ6ZV65 393 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 ZNF571Q7Z3V5 609 aaPredicted RBP11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 ERICH1Q86X53 443 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 C10orf88Q9H8K7 445 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 M0QZ92 97 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 BACE1P56817 501 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 CBWD6Q4V339 395 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 CBWD3Q5JTY5 395 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 CBWD5Q5RIA9 395 aa11.56□□□□□ -0.56
TGFBR1-209ENST00000552516 KRT39Q6A163 491 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms