RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 PNMA8AQ86V59 439 aaPredicted RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 SCFD2Q8WU76 684 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 LPAR1Q92633 364 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 MAGOHBQ96A72 148 aaKnown RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 PGM2Q96G03 612 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 ZNF317Q96PQ6 595 aaPredicted RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 POLR3CQ9BUI4 534 aaPredicted RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 WDR18Q9BV38 432 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 ZNF341Q9BYN7 854 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 KCTD10Q9H3F6 313 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 ZFATQ9P243 1243 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 FEM1BQ9UK73 627 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 EML1O00423 815 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 SERPING1P05155 500 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 VIMP08670 466 aaKnown RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 TMOD1P28289 359 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 ECHS1P30084 290 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 GCLCP48506 637 aaPredicted RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 PABPC4Q13310 644 aaKnown RBP eCLIP11.9□□□□□ -0.56e-37■■■□□ 15.7
TUBA1C-209ENST00000552448 CLUL1Q15846 466 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 UAP1Q16222 522 aaPredicted RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 KRT71Q3SY84 523 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 PDXDC1Q6P996 788 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 ZC3H3Q8IXZ2 948 aaKnown RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 UBLCP1Q8WVY7 318 aaPredicted RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 SEC14L1Q92503 715 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 MS4A14Q96JA4 679 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 CEP63Q96MT8 703 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 EIF2AK1Q9BQI3 630 aaKnown RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 RAB17Q9H0T7 212 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 FBXO28Q9NVF7 368 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 MRPL11Q9Y3B7 192 aaKnown RBP11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 COL4A3BPQ9Y5P4 624 aa11.9□□□□□ -0.5
TUBA1C-209ENST00000552448 CCDC169A6NNP5 214 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 O00370 1275 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 TRAF5O00463 557 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 EPHB6O15197 1021 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 SART1O43290 800 aaKnown RBP11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 PALMO75781 387 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 PSMD10O75832 226 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 KRT18P05783 430 aaKnown RBP11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 ATP2A2P16615 1042 aaKnown RBP11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 SKIV2L2P42285 1042 aaKnown RBP11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 MARSP56192 900 aaKnown RBP11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 ERVK-9P63128 1117 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 MRPS25P82663 173 aaKnown RBP11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 MRPS35P82673 323 aaKnown RBP11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 RPS6KA1Q15418 735 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 ANGEL2Q5VTE6 544 aaKnown RBP11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 OTOP1Q7RTM1 612 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 LDHDQ86WU2 507 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 LMNTD2Q8IXW0 634 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 KCTD17Q8N5Z5 321 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 AGAP11Q8TF27 550 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 SLC5A5Q92911 643 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 ZNF570Q96NI8 536 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 PSMB7Q99436 277 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 HSD17B14Q9BPX1 270 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 REEP2Q9BRK0 252 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 KIAA1683Q9H0B3 1180 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 ADARB2Q9NS39 739 aaKnown RBP11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 SMARCAL1Q9NZC9 954 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 ZNF112Q9UJU3 913 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 FBXL5Q9UKA1 691 aa11.89□□□□□ -0.51
TUBA1C-209ENST00000552448 LRRC53A6NM62 1247 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 WDR46O15213 610 aaKnown RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 ATP2C2O75185 946 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 RTN3O95197 1032 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 PLEKP08567 350 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 NUDT17P0C025 328 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 CNGA1P29973 690 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 GBP1P32455 592 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 MMP13P45452 471 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 PAPOLAP51003 745 aaKnown RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 PDE6CP51160 858 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 CYP4A11Q02928 519 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 LBRQ14739 615 aaKnown RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 SUPT20HL1Q3ZLR7 823 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 CWF19L1Q69YN2 538 aaKnown RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 RRAGAQ7L523 313 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 EPM2AIP1Q7L775 607 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 TMC3Q7Z5M5 1100 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 APBB1IPQ7Z5R6 666 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 TBC1D1Q86TI0 1168 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 NELFCDQ8IXH7 590 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 RAB3IPQ96QF0 476 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 AS3MTQ9HBK9 375 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 RGL1Q9NZL6 768 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 EHD2Q9NZN4 543 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 RNF181Q9P0P0 153 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 CNOT8Q9UFF9 292 aaKnown RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 UTRNP46939 3433 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 LRRD1A4D1F6 860 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 ZSCAN5CA6NGD5 496 aaPredicted RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 F8VZ95 297 aa11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 PGRMC1O00264 195 aaKnown RBP11.88□□□□□ -0.51
TUBA1C-209ENST00000552448 DIAPH2O60879 1101 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms