RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	GLRA2	P23416	452 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	CNGA1	P29973	690 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	ARL2	P36404	184 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	GCLM	P48507	274 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	MXI1	P50539	228 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	ERVK-9	P63128	1117 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	NAB2	Q15742	525 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	SNRNP35	Q16560	246 aa	Known RBP	12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	FAM160B1	Q5W0V3	765 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	PHLDB3	Q6NSJ2	640 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	METTL7B	Q6UX53	244 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	EEPD1	Q7L9B9	569 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	CTAGE6	Q86UF2	777 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	CTAGE4	Q8IX94	777 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	RNF10	Q8N5U6	811 aa	Known RBP	12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	MSANTD4	Q8NCY6	345 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	LNX1	Q8TBB1	728 aa	Predicted RBP	12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	IFT74	Q96LB3	600 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	ALS2CR12	Q96Q35	445 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	TMEM117	Q9H0C3	514 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	PORCN	Q9H237	461 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	MROH8	Q9H579	483 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	DDX41	Q9UJV9	622 aa	Known RBP	12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	NAGPA	Q9UK23	515 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	USP20	Q9Y2K6	914 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	JRKL	Q9Y4A0	524 aa		12.51	□□□□□ -0.41
RAB5C-208	ENST00000551338	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	BTNL10	A8MVZ5	291 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	LGR5	O75473	907 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	PIGR	P01833	764 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	TCF7	P36402	384 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	RFC5	P40937	340 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	NAMPT	P43490	491 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	CKAP4	Q07065	602 aa	Known RBP	12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	KCTD2	Q14681	263 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	GPR162	Q16538	588 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	LY6K	Q17RY6	165 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	C10orf76	Q5T2E6	689 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	PNMA8A	Q86V59	439 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	FBXO16	Q8IX29	292 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	GPD1L	Q8N335	351 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	TMC2	Q8TDI7	906 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	SEPT1	Q8WYJ6	367 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	TMEM143	Q96AN5	459 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	MFSD14A	Q96MC6	490 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	NOX5	Q96PH1	765 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	MMS19	Q96T76	1030 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	MPHOSPH6	Q99547	160 aa	Known RBP	12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	CCDC94	Q9BW85	323 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	ANKZF1	Q9H8Y5	726 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	SNX12	Q9UMY4	172 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	HYOU1	Q9Y4L1	999 aa		12.5	□□□□□ -0.41
RAB5C-208	ENST00000551338	LOC102724159	A0A0B4J2E5	919 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	UNCX	A6NJT0	531 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	PDE2A	O00408	941 aa	Predicted RBP	12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	NCK2	O43639	380 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	EDN1	P05305	212 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	CYP2C8	P10632	490 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	ABCD1	P33897	745 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	STAT5B	P51692	787 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	ENPEP	Q07075	957 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	CYP24A1	Q07973	514 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	BMS1	Q14692	1282 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	KIF22	Q14807	665 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	PWP2	Q15269	919 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	ARHGAP44	Q17R89	818 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	KIAA0753	Q2KHM9	967 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	BRDT	Q58F21	947 aa	Predicted RBP	12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	CELF3	Q5SZQ8	465 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	MAP1S	Q66K74	1059 aa	Predicted RBP	12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	ALKBH5	Q6P6C2	394 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	CCDC62	Q6P9F0	684 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	KCNV1	Q6PIU1	500 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	NOA1	Q8NC60	698 aa	Known RBP	12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	SLC30A5	Q8TAD4	765 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	PARD3B	Q8TEW8	1205 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	POMGNT1	Q8WZA1	660 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	SLC10A4	Q96EP9	437 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	GPR20	Q99678	358 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	ARID3A	Q99856	593 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	TLR10	Q9BXR5	811 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	PARD6B	Q9BYG5	372 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	EFCC1	Q9HA90	598 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	TMEM8A	Q9HCN3	771 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	ZNF446	Q9NWS9	450 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	PNMA3	Q9UL41	463 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	COQ4	Q9Y3A0	265 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	PCDHGC5	Q9Y5F6	944 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	KAT6A	Q92794	2004 aa		12.49	□□□□□ -0.41
RAB5C-208	ENST00000551338	NCAN	O14594	1321 aa		12.48	□□□□□ -0.41
RAB5C-208	ENST00000551338	GRID2IP	A4D2P6	1211 aa		12.48	□□□□□ -0.41
RAB5C-208	ENST00000551338	LRRIQ4	A6NIV6	560 aa		12.48	□□□□□ -0.41
RAB5C-208	ENST00000551338	HNRNPDL	O14979	420 aa	Known RBP	12.48	□□□□□ -0.41
RAB5C-208	ENST00000551338	ZNF185	O15231	689 aa		12.48	□□□□□ -0.41
RAB5C-208	ENST00000551338	PRLR	P16471	622 aa		12.48	□□□□□ -0.41
RAB5C-208	ENST00000551338	MAP2K1	Q02750	393 aa	Predicted RBP	12.48	□□□□□ -0.41
RAB5C-208	ENST00000551338	CAPS	Q13938	189 aa		12.48	□□□□□ -0.41
RAB5C-208	ENST00000551338	WDR78	Q5VTH9	848 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms