RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 PHLPP2Q6ZVD8 1323 aa14.87□□□□□ -0.03
ERBB3-215ENST00000550828 TTC3P53804 2025 aa14.87□□□□□ -0.03
ERBB3-215ENST00000550828 TISP43B9A030 160 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 INO80B-WBP1J3KQ70 363 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 M0QZ92 97 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 TSPAN1O60635 241 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 GCNT3O95395 438 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 PRKCBP05771 671 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 CD52P31358 61 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 FAM187BQ17R55 369 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 SKOR2Q2VWA4 1001 aaPredicted RBP14.86□□□□□ -0.03
ERBB3-215ENST00000550828 SLC39A4Q6P5W5 647 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 PPP4R3CPQ6ZMV5 832 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 ZNF710Q8N1W2 664 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 DEFB123Q8N688 67 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 LINC01599Q8WXQ3 324 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 GDF15Q99988 308 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 INO80BQ9C086 356 aaPredicted RBP14.86□□□□□ -0.03
ERBB3-215ENST00000550828 C2orf40Q9H1Z8 148 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 TMEM134Q9H6X4 195 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 TBX20Q9UMR3 447 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 MAPK8IP1Q9UQF2 711 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 RALGAPA2Q2PPJ7 1873 aa14.86□□□□□ -0.03
ERBB3-215ENST00000550828 RANBP2P49792 3224 aaKnown RBP14.86□□□□□ -0.03
ERBB3-215ENST00000550828 MGEA5O60502 916 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 CXCL10P02778 98 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 CSF2RAP15509 400 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 RAG1P15918 1043 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 HOXA11P31270 313 aaPredicted RBP14.85□□□□□ -0.03
ERBB3-215ENST00000550828 EPHB4P54760 987 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 CDC42EP1Q00587 391 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 BMT2Q1RMZ1 405 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 LRIT3Q3SXY7 679 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 PLEKHG4Q58EX7 1191 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 L1TD1Q5T7N2 865 aaKnown RBP14.85□□□□□ -0.03
ERBB3-215ENST00000550828 ZNF658Q5TYW1 1059 aaPredicted RBP14.85□□□□□ -0.03
ERBB3-215ENST00000550828 EEF1DP3Q658K8 133 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 TSHZ1Q6ZSZ6 1077 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 MAP4K3Q8IVH8 894 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 ZBTB8OSQ8IWT0 167 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 ZNF507Q8TCN5 953 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 BADQ92934 168 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 HAPLN2Q9GZV7 340 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 PADI3Q9ULW8 664 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 ST3GAL5Q9UNP4 418 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 SQORQ9Y6N5 450 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 CNTNAP2Q9UHC6 1331 aa14.85□□□□□ -0.03
ERBB3-215ENST00000550828 GBF1Q92538 1859 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 PPP1R3GB7ZBB8 358 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 ANKRD63C9JTQ0 380 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 K7ERI5 159 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 ABLIM1O14639 778 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 EIF3DO15371 548 aaKnown RBP eCLIP14.84□□□□□ -0.03
ERBB3-215ENST00000550828 RPS6KA5O75582 802 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 ARF4P18085 180 aaPredicted RBP14.84□□□□□ -0.03
ERBB3-215ENST00000550828 PRCPP42785 496 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 EFNA5P52803 228 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 SMTNP53814 917 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 PSMD2Q13200 908 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 DSC3Q14574 896 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 DPCR1Q3MIW9 517 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 MFSD5Q6N075 450 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 CDR2LQ86X02 465 aaPredicted RBP14.84□□□□□ -0.03
ERBB3-215ENST00000550828 NELFCDQ8IXH7 590 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 HVCN1Q96D96 273 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 CPB2Q96IY4 423 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 FUCA2Q9BTY2 467 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 TARS2Q9BW92 718 aaKnown RBP14.84□□□□□ -0.03
ERBB3-215ENST00000550828 AGPAT5Q9NUQ2 364 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 RMND1Q9NWS8 449 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 COL4A6Q14031 1691 aa14.84□□□□□ -0.03
ERBB3-215ENST00000550828 FNDC1Q4ZHG4 1894 aaPredicted RBP14.83□□□□□ -0.04
ERBB3-215ENST00000550828 ACKR2O00590 384 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 TGFB1I1O43294 461 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 PIGRP01833 764 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 PMS1P54277 932 aaKnown RBP14.83□□□□□ -0.04
ERBB3-215ENST00000550828 MAPK6Q16659 721 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 ZSCAN23Q3MJ62 389 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 COBLL1Q53SF7 1204 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 UBXN11Q5T124 520 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 C16orf59Q7L2K0 433 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 CATSPER4Q7RTX7 472 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 DEFB128Q7Z7B8 93 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 RTN4RL1Q86UN2 441 aaPredicted RBP14.83□□□□□ -0.04
ERBB3-215ENST00000550828 TRIML1Q8N9V2 468 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 DBF4BQ8NFT6 615 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 ZBTB45Q96K62 511 aaPredicted RBP14.83□□□□□ -0.04
ERBB3-215ENST00000550828 MED15Q96RN5 788 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 ACO2Q99798 780 aaKnown RBP14.83□□□□□ -0.04
ERBB3-215ENST00000550828 IFIH1Q9BYX4 1025 aaKnown RBP14.83□□□□□ -0.04
ERBB3-215ENST00000550828 KCTD10Q9H3F6 313 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 PDZD7Q9H5P4 517 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 PRMT7Q9NVM4 692 aaPredicted RBP14.83□□□□□ -0.04
ERBB3-215ENST00000550828 UBE4BO95155 1302 aa14.83□□□□□ -0.04
ERBB3-215ENST00000550828 SYCE3A1L190 88 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 ACRP10323 421 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 PROZP22891 400 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 NLRP12P59046 1061 aa14.82□□□□□ -0.04
ERBB3-215ENST00000550828 NFX1Q12986 1120 aaKnown RBP14.82□□□□□ -0.04
ERBB3-215ENST00000550828 PAK2Q13177 524 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms