RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 CDC42EP1Q00587 391 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 GIT2Q14161 759 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
RAB5B-208ENST00000550283 E2F4Q16254 413 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 EPC2Q52LR7 807 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 TWF2Q6IBS0 349 aaKnown RBP12.4□□□□□ -0.42
RAB5B-208ENST00000550283 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 CDK5RAP3Q96JB5 506 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 ZNF396Q96N95 335 aaPredicted RBP12.4□□□□□ -0.42
RAB5B-208ENST00000550283 TGS1Q96RS0 853 aaKnown RBP12.4□□□□□ -0.42
RAB5B-208ENST00000550283 FIZ1Q96SL8 496 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 NFKBIZQ9BYH8 718 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 FGFBP2Q9BYJ0 223 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 NXF3Q9H4D5 531 aaKnown RBP12.4□□□□□ -0.42
RAB5B-208ENST00000550283 PDZD7Q9H5P4 517 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 FAM105AQ9NUU6 356 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 RCOR1Q9UKL0 485 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 PCDHB7Q9Y5E2 793 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 ATG2AQ2TAZ0 1938 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 SLC16A4O15374 487 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 MEFVO15553 781 aaPredicted RBP12.39□□□□□ -0.43
RAB5B-208ENST00000550283 PPP6R2O75170 966 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 CSPG5O95196 566 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 ZSCAN20P17040 1043 aaPredicted RBP12.39□□□□□ -0.43
RAB5B-208ENST00000550283 CASP1P29466 404 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 CAMK1Q14012 370 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 TFDP1Q14186 410 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 TMEM192Q8IY95 271 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 CMTR2Q8IYT2 770 aaKnown RBP12.39□□□□□ -0.43
RAB5B-208ENST00000550283 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 FIBCD1Q8N539 461 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 LEO1Q8WVC0 666 aaPredicted RBP12.39□□□□□ -0.43
RAB5B-208ENST00000550283 LARP4BQ92615 738 aaKnown RBP12.39□□□□□ -0.43
RAB5B-208ENST00000550283 CLP1Q92989 425 aaKnown RBP12.39□□□□□ -0.43
RAB5B-208ENST00000550283 CALML4Q96GE6 196 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 TRAIPQ9BWF2 469 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 NT5C3AQ9H0P0 336 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 ELAC1Q9H777 363 aaKnown RBP12.39□□□□□ -0.43
RAB5B-208ENST00000550283 CHST12Q9NRB3 414 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 TYW1Q9NV66 732 aaKnown RBP12.39□□□□□ -0.43
RAB5B-208ENST00000550283 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 ARHGAP28Q9P2N2 729 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 LRFN2Q9ULH4 789 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 STXBP5LQ9Y2K9 1186 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 PCDHGC5Q9Y5F6 944 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 MTCH2Q9Y6C9 303 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
RAB5B-208ENST00000550283 XIRP2A4UGR9 3374 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 NLRC5Q86WI3 1866 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 ABLIM1O14639 778 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 GRM6O15303 877 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 CUTAO60888 179 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 OFD1O75665 1012 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 NPTXRO95502 500 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 PRKCBP05771 671 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 STAG3L1P0CL83 205 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 FOSL2P15408 326 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 IGFBP4P22692 258 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 BECN1Q14457 450 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 CCDC85BQ15834 202 aaPredicted RBP12.38□□□□□ -0.43
RAB5B-208ENST00000550283 FAM187BQ17R55 369 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 ODR4Q5SWX8 454 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 DYMQ7RTS9 669 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 MRPL10Q7Z7H8 261 aaKnown RBP12.38□□□□□ -0.43
RAB5B-208ENST00000550283 TMEM173Q86WV6 379 aaPredicted RBP12.38□□□□□ -0.43
RAB5B-208ENST00000550283 TMEM161BQ8NDZ6 487 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 BCL7CQ8WUZ0 217 aaPredicted RBP12.38□□□□□ -0.43
RAB5B-208ENST00000550283 KIFAP3Q92845 792 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 DNAJC19Q96DA6 116 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 ZBTB45Q96K62 511 aaPredicted RBP12.38□□□□□ -0.43
RAB5B-208ENST00000550283 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 CACNG4Q9UBN1 327 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 PLAGL2Q9UPG8 496 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 IPPQ9Y573 584 aa12.38□□□□□ -0.43
RAB5B-208ENST00000550283 SPTBN5Q9NRC6 3674 aaKnown RBP12.38□□□□□ -0.43
RAB5B-208ENST00000550283 CNTNAP2Q9UHC6 1331 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 A0A1B0GUA9 196 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 CCDC169A6NNP5 214 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 F8W810 466 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 SLC26A4O43511 780 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 ZNF623O75123 536 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 ERLIN2O94905 339 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 PLS3P13797 630 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 AKAP5P24588 427 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 IGFBP6P24592 240 aaPredicted RBP12.37□□□□□ -0.43
RAB5B-208ENST00000550283 NMT1P30419 496 aaKnown RBP12.37□□□□□ -0.43
RAB5B-208ENST00000550283 CTNNB1P35222 781 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 BMPR1AP36894 532 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 ZNF131P52739 623 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 RESP18Q5W5W9 173 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 ZNF280BQ86YH2 543 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 GRAMD1CQ8IYS0 662 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 CEP120Q8N960 986 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 GLIS3Q8NEA6 775 aa12.37□□□□□ -0.43
RAB5B-208ENST00000550283 GSTCDQ8NEC7 633 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms