RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	B4GALT5	O43286	388 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	HIP1R	O75146	1068 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ITGB1	P05556	798 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PLA2G4B	P0C869	781 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ARF4	P18085	180 aa	Predicted RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	NCL	P19338	710 aa	Known RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	GUCY2C	P25092	1073 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	MARCKS	P29966	332 aa	Predicted RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	EFNA5	P52803	228 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CEBPZ	Q03701	1054 aa	Known RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	DMP1	Q13316	513 aa	Predicted RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	FAM187B	Q17R55	369 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LONRF3	Q496Y0	759 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	NOMO2	Q5JPE7	1267 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SLC27A1	Q6PCB7	646 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LRRC55	Q6ZSA7	311 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	MRPL10	Q7Z7H8	261 aa	Known RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	THNSL1	Q8IYQ7	743 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LPP	Q93052	612 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ZNF558	Q96NG5	402 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	USP28	Q96RU2	1077 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	EIF2A	Q9BY44	585 aa	Known RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	TRIM6	Q9C030	488 aa	Predicted RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CCDC113	Q9H0I3	377 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	FZD8	Q9H461	694 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	C17orf75	Q9HAS0	396 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ALG13	Q9NP73	1137 aa	Known RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	UBN1	Q9NPG3	1134 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PRDM6	Q9NQX0	595 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	HCST	Q9UBK5	93 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	FBXO2	Q9UK22	296 aa	Predicted RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	IPP	Q9Y573	584 aa		13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SRPRB	Q9Y5M8	271 aa	Known RBP	13.19	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PHLPP2	Q6ZVD8	1323 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188		A0A1B0GUA9	196 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	MEIS3P2	A8K0S8	358 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PRKCB	P05771	671 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PLCG1	P19174	1290 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PPM1A	P35813	382 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	NPTX2	P47972	431 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	NASP	P49321	788 aa	Predicted RBP	13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SLC12A3	P55017	1021 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PEX3	P56589	373 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	UBE3A	Q05086	875 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	MAPK7	Q13164	816 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PRPF4B	Q13523	1007 aa	Known RBP	13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SLC39A14	Q15043	492 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KARS	Q15046	597 aa	Known RBP	13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	TMEM132A	Q24JP5	1023 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	AGMO	Q6ZNB7	445 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	HACE1	Q8IYU2	909 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	DAW1	Q8N136	415 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SMG8	Q8ND04	991 aa	Known RBP	13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	URGCP	Q8TCY9	931 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KIFC3	Q9BVG8	833 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CCSER1	Q9C0I3	900 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	NSUN3	Q9H649	340 aa	Known RBP	13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	RSAD1	Q9HA92	442 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	POLD4	Q9HCU8	107 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	INPP5F	Q9Y2H2	1132 aa		13.18	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CARNS1	A5YM72	827 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CCDC169	A6NNP5	214 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ACKR2	O00590	384 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	N4BP3	O15049	544 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	OFD1	O75665	1012 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	FGF18	O76093	207 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ITGA4	P13612	1032 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LIG1	P18858	919 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	TXLNA	P40222	546 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	RNASEL	Q05823	741 aa	Known RBP	13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	STK38	Q15208	465 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KCNT2	Q6UVM3	1135 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KRI1	Q8N9T8	703 aa	Known RBP	13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SPPL3	Q8TCT6	385 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	POF1B	Q8WVV4	589 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	RAD54L	Q92698	747 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KMT5A	Q9NQR1	393 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	TBC1D13	Q9NVG8	400 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CHD7	Q9P2D1	2997 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KCNG1	Q9UIX4	513 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	COG5	Q9UP83	839 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	LOXHD1	Q8IVV2	1947 aa		13.17	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	RALGAPA2	Q2PPJ7	1873 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188		K7ERI5	159 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	NPTXR	O95502	500 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PLS3	P13797	630 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	DNAJB1	P25685	340 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	ALDH7A1	P49419	539 aa	Known RBP	13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KRT85	P78386	507 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	MRPS5	P82675	430 aa	Known RBP	13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PLCB3	Q01970	1234 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KRT17	Q04695	432 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	RAD51AP2	Q09MP3	1159 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	AAK1	Q2M2I8	961 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	TCEAL5	Q5H9L2	206 aa		13.16	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SPECC1	Q5M775	1068 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms