RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 ENO4A6NNW6 628 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 PPEF1O14829 653 aaPredicted RBP10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 ZNF263O14978 683 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 GPSM2P81274 684 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 FUT2Q10981 343 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 MAPK7Q13164 816 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 RASA3Q14644 834 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 DLGAP5Q15398 846 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 RCSD1Q6JBY9 416 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 ZC3H18Q86VM9 953 aaKnown RBP10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 SUPT20HQ8NEM7 779 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 MAML1Q92585 1016 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 TTC17Q96AE7 1141 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 SNF8Q96H20 258 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 GINM1Q9NU53 330 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 H7C0C1 242 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 NDC80O14777 642 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 GYG2O15488 501 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 PJA2O43164 708 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 MED24O75448 989 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 ATP5OP48047 213 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 PRELPP51888 382 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 IZUMO3Q5VZ72 239 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 CENPUQ71F23 418 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 FBXO41Q8TF61 875 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 CYTH2Q99418 400 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 OSBPL1AQ9BXW6 950 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 ZFP69BQ9UJL9 534 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 F8VZ95 297 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 AKAP3O75969 853 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 CD58P19256 250 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 ANXA13P27216 316 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 SSTR3P32745 418 aaPredicted RBP10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 RNASELQ05823 741 aaKnown RBP10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 FAM208AQ9UK61 1670 aaKnown RBP10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 ZNF335Q9H4Z2 1342 aaPredicted RBP10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 AGPSO00116 658 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 SLC16A3O15427 465 aaKnown RBP10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 EIF2AK2P19525 551 aaKnown RBP10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 PSMD6Q15008 389 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 ANKRD20A8PQ5CZ79 823 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 DNAJC24Q6P3W2 148 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 SEPT14Q6ZU15 432 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 ARMC2Q8NEN0 867 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 RAB3IL1Q8TBN0 382 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 ERP27Q96DN0 273 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 LXNQ9BS40 222 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 CALN1Q9BXU9 219 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 SEMA4AQ9H3S1 761 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 RNF8O76064 485 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 FSBPO95073 299 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 ZNF394Q53GI3 561 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 CNPY4Q8N129 248 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 DCAF4Q8WV16 495 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 ALG13Q9NP73 1137 aaKnown RBP10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 DAGLAQ9Y4D2 1042 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 TACC3Q9Y6A5 838 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 PITPNM2Q9BZ72 1349 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 CFAP69A5D8W1 941 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 RTN2O75298 545 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 ALDH1B1P30837 517 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 SERPINB6P35237 376 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 INTS5Q6P9B9 1019 aaKnown RBP10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 ARHGAP27Q6ZUM4 889 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 RFX8Q6ZV50 586 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 TMEM179Q6ZVK1 233 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 C3orf67Q6ZVT6 689 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 TMC3Q7Z5M5 1100 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 RFX6Q8HWS3 928 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 C4orf33Q8N1A6 199 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 SYT2Q8N9I0 419 aaPredicted RBP10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 ARHGEF1Q92888 912 aaKnown RBP10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 FAM129AQ9BZQ8 928 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 SEL1LQ9UBV2 794 aa10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 SEPT9Q9UHD8 586 aaPredicted RBP10.92□□□□□ -0.66
SMARCC2-209ENST00000550164 ZBED4O75132 1171 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 CDH16O75309 829 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 ATP5HO75947 161 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 GGPS1O95749 300 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 SCP2P22307 547 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 RPA1P27694 616 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 PSMC4P43686 418 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 IRX4P78413 519 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 GPS1Q13098 491 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 ZBED8Q8IZ13 594 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 TNFRSF25Q93038 417 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 TRIM55Q9BYV6 548 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 AIPL1Q9NZN9 384 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 LMTK3Q96Q04 1460 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 FOXN3O00409 490 aaPredicted RBP10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 UBOX5O94941 541 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 HMGB2P26583 209 aaKnown RBP10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 POLGP54098 1239 aaPredicted RBP10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 CAV1Q03135 178 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 TRMT10CQ7L0Y3 403 aaKnown RBP10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 FUKQ8N0W3 1084 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 PDIK1LQ8N165 341 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 ZNF526Q8TF50 670 aaPredicted RBP10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 BAP1Q92560 729 aa10.91□□□□□ -0.66
SMARCC2-209ENST00000550164 KLHL11Q9NVR0 708 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms