RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 KLHL29Q96CT2 875 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 CALR3Q96L12 384 aaKnown RBP11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 PKD2L1Q9P0L9 805 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 RASAL2Q9UJF2 1139 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 RASGRF2O14827 1237 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 GCKP35557 465 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 COBLL1Q53SF7 1204 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 ERMARDQ5T6L9 678 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 DCAF12L1Q5VU92 463 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 C16orf86Q6ZW13 317 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 TRPM8Q7Z2W7 1104 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 FAM186BQ8IYM0 893 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 SYCP3Q8IZU3 236 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 CNOT10Q9H9A5 744 aaKnown RBP11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 ACP6Q9NPH0 428 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 CTNNAL1Q9UBT7 734 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 MTRF1LQ9UGC7 380 aaKnown RBP11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 MYH7BA7E2Y1 1941 aa11.59□□□□□ -0.55
SMARCC2-208ENST00000550150 CLRN2A0PK11 232 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 SPOPO43791 374 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 FAM13AO94988 1023 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 ANP32DO95626 131 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 VIL1P09327 827 aaKnown RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 GCFC2P16383 781 aaKnown RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 CAPN12Q6ZSI9 719 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 FAM47EQ6ZV65 393 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 CPNE8Q86YQ8 564 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 CYP2W1Q8TAV3 490 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 FAM118BQ9BPY3 351 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 RUSC1Q9BVN2 902 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 PCIF1Q9H4Z3 704 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 MTMR4Q9NYA4 1195 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 PNMA6FA0A0J9YX94 578 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 RPL13P26373 211 aaKnown RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 GJC1P36383 396 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 RSBN1LQ6PCB5 846 aaPredicted RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 SPDL1Q96EA4 605 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 SH2D3AQ9BRG2 576 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 DDX23Q9BUQ8 820 aaKnown RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 FHDC1Q9C0D6 1143 aaPredicted RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 PABPC3Q9H361 631 aaKnown RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 ECT2Q9H8V3 914 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 SUCLA2Q9P2R7 463 aaPredicted RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 AGAP1Q9UPQ3 857 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 SUGT1Q9Y2Z0 365 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 SHMT1P34896 483 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 GIT2Q14161 759 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 C10orf76Q5T2E6 689 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 NAIF1Q69YI7 327 aaPredicted RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 CCDC137Q6PK04 289 aaKnown RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 SPICE1Q8N0Z3 855 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 AGAP11Q8TF27 550 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 ATP8B4Q8TF62 1192 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 SLC35C1Q96A29 364 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 HOOK2Q96ED9 719 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 ANO3Q9BYT9 981 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 TRIM6Q9C030 488 aaPredicted RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 NSRP1Q9H0G5 558 aaKnown RBP11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 RIOX1Q9H6W3 641 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 ASIC3Q9UHC3 531 aa11.58□□□□□ -0.56
SMARCC2-208ENST00000550150 GSTTP1A0A1W2PQM5 241 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 TCRBV7S2A1N4TA0A589 114 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 RPL21P46778 160 aaKnown RBP11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 ZFYVE27Q5T4F4 411 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 ARMC9Q7Z3E5 817 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 SLC17A8Q8NDX2 589 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 RFFLQ8WZ73 363 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 PAGR1Q9BTK6 254 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 PNMA3Q9UL41 463 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 FERP16591 822 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 EIF3BP55884 814 aaKnown RBP11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 EPHA7Q15375 998 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 HP1BP3Q5SSJ5 553 aaPredicted RBP11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 CC2D2BQ6DHV5 1058 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 ERMNQ8TAM6 284 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 TAOK3Q9H2K8 898 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 ALG6Q9Y672 507 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 CNTNAP1P78357 1384 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
SMARCC2-208ENST00000550150 DDX39AO00148 427 aaKnown RBP11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 EXOC3O60645 756 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 DLATP10515 647 aaKnown RBP11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 SOX5P35711 763 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 CALCOCO2Q13137 446 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 XRCC4Q13426 336 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 ASPRV1Q53RT3 343 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 FRMD5Q7Z6J6 570 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 C1orf54Q8WWF1 131 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 PWWP2AQ96N64 755 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 KDM4CQ9H3R0 1056 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 A1CFQ9NQ94 594 aaKnown RBP11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 PCDHA2Q9Y5H9 948 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 ANKRD63C9JTQ0 380 aa11.56□□□□□ -0.56
SMARCC2-208ENST00000550150 SSR1P43307 286 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms