RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SLC1A4P43007 532 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 AIF1P55008 147 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 TBX4P57082 545 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 TRIM29Q14134 588 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 TMEM266Q2M3C6 531 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 GNPTABQ3T906 1256 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 PKDCCQ504Y2 493 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 LHX8Q68G74 356 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 ACER1Q8TDN7 264 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 JARID2Q92833 1246 aaPredicted RBP5.4□□□□□ -1.55
SCAF11-212ENST00000549162 AZIN2Q96A70 460 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 ZNF689Q96CS4 500 aaPredicted RBP5.4□□□□□ -1.55
SCAF11-212ENST00000549162 ZNF830Q96NB3 372 aaPredicted RBP5.4□□□□□ -1.55
SCAF11-212ENST00000549162 INSM2Q96T92 566 aaPredicted RBP5.4□□□□□ -1.55
SCAF11-212ENST00000549162 HINFPQ9BQA5 517 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 LHX5Q9H2C1 402 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 UNC45AQ9H3U1 944 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 ASB7Q9H672 318 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 ABCB6Q9NP58 842 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 C1orf112Q9NSG2 853 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 ZMYM5Q9UJ78 669 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 KIAA1257Q9ULG3 409 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 BZW2Q9Y6E2 419 aaKnown RBP5.4□□□□□ -1.55
SCAF11-212ENST00000549162 LGALS16A8MUM7 142 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 ADAMTS3O15072 1205 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 NPHP1O15259 732 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 CTSHP09668 335 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 GRM5P41594 1212 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 STXBP2Q15833 593 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 FAM109BQ6ICB4 259 aaPredicted RBP5.4□□□□□ -1.55
SCAF11-212ENST00000549162 SLFN12LQ6IEE8 588 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 MIS18BP1Q6P0N0 1132 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 VSTM4Q8IW00 320 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 CCDC117Q8IWD4 279 aaPredicted RBP5.4□□□□□ -1.55
SCAF11-212ENST00000549162 LRRC52Q8N7C0 313 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 KIAA0895Q8NCT3 520 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 TBCKQ8TEA7 893 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 FNIP1Q8TF40 1166 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 ATP6V0A1Q93050 837 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 PRKD2Q9BZL6 878 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 ZNF518BQ9C0D4 1074 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 GPR88Q9GZN0 384 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 STOML2Q9UJZ1 356 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 NOD1Q9Y239 953 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 CSADQ9Y600 493 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 RAD54BQ9Y620 910 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 EP400Q96L91 3159 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 SNAP23O00161 211 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 GALR2O43603 387 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CREB3O43889 395 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CCNE2O96020 404 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 MYBP10242 640 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 ZNF568Q3ZCX4 644 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 FAM160B1Q5W0V3 765 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 RINT1Q6NUQ1 792 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 OLFM4Q6UX06 510 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 DTHD1Q6ZMT9 781 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 GPR142Q7Z601 462 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 TMEM161BQ8NDZ6 487 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 KAT2BQ92831 832 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 FAM131CQ96AQ9 280 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 VWCEQ96DN2 955 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CSRNP2Q9H175 543 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 TMEM60Q9H2L4 133 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 SMARCAD1Q9H4L7 1026 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CYP3A43Q9HB55 503 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 LMCD1Q9NZU5 365 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 MAP10Q9P2G4 905 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 PCDHA10Q9Y5I2 948 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 ENPP3O14638 875 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 ZBTB7AO95365 584 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 GH1P01241 217 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 S100BP04271 92 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-212ENST00000549162 MMP3P08254 477 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 NPR3P17342 541 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 STAT3P40763 770 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 LACTBP83111 547 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CALCRLQ16602 461 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 MAP7D1Q3KQU3 841 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 NYAP1Q6ZVC0 841 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CATSPER3Q86XQ3 398 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 TSEN2Q8NCE0 465 aaKnown RBP5.39□□□□□ -1.55
SCAF11-212ENST00000549162 TRERF1Q96PN7 1200 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 NCAPGQ9BPX3 1015 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 ZFYVE28Q9HCC9 887 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 ZNHIT6Q9NWK9 470 aaKnown RBP5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CLIP2Q9UDT6 1046 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 A0A0B4J269 797 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 BTBD18B2RXH4 712 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 SEPT4O43236 478 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 CBFA2T2O43439 604 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 NDUFB5O43674 189 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 POTEJP0CG39 1038 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 SETSIPP0DME0 302 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 LIG1P18858 919 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 QARSP47897 775 aaKnown RBP5.39□□□□□ -1.55
SCAF11-212ENST00000549162 RASA2Q15283 850 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 FAM83BQ5T0W9 1011 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 TREML2Q5T2D2 321 aa5.39□□□□□ -1.55
SCAF11-212ENST00000549162 ARHGAP17Q68EM7 881 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms