RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 TIGD2Q4W5G0 525 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 CDCA2Q69YH5 1023 aaPredicted RBP6.58□□□□□ -1.36
CNOT2-215ENST00000548863 CPPED1Q9BRF8 314 aaPredicted RBP6.58□□□□□ -1.36
CNOT2-215ENST00000548863 RIOX1Q9H6W3 641 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 ZMAT4Q9H898 229 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 INTS7Q9NVH2 962 aaKnown RBP6.58□□□□□ -1.36
CNOT2-215ENST00000548863 OXSMQ9NWU1 459 aa6.58□□□□□ -1.36
CNOT2-215ENST00000548863 USP36Q9P275 1121 aaKnown RBP6.58□□□□□ -1.36
CNOT2-215ENST00000548863 MYPNQ86TC9 1320 aa6.57□□□□□ -1.36
CNOT2-215ENST00000548863 DNAJC6O75061 913 aa6.57□□□□□ -1.36
CNOT2-215ENST00000548863 JMJD7P0C870 316 aa6.57□□□□□ -1.36
CNOT2-215ENST00000548863 PIK3C3Q8NEB9 887 aa6.57□□□□□ -1.36
CNOT2-215ENST00000548863 RTF1Q92541 710 aaKnown RBP6.57□□□□□ -1.36
CNOT2-215ENST00000548863 ZNF764Q96H86 408 aaPredicted RBP6.57□□□□□ -1.36
CNOT2-215ENST00000548863 NDC1Q9BTX1 674 aa6.57□□□□□ -1.36
CNOT2-215ENST00000548863 TMEM200CA6NKL6 621 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 ZAR1LA6NP61 321 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 APOL3O95236 402 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 CD69Q07108 199 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 SQSTM1Q13501 440 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 FAM214AQ32MH5 1076 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 CFAP100Q494V2 611 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 DCLRE1CQ96SD1 692 aaKnown RBP6.56□□□□□ -1.36
CNOT2-215ENST00000548863 CPEB1Q9BZB8 566 aaKnown RBP6.56□□□□□ -1.36
CNOT2-215ENST00000548863 TOMM22Q9NS69 142 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 CLCA2Q9UQC9 943 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 PCDHB6Q9Y5E3 794 aa6.56□□□□□ -1.36
CNOT2-215ENST00000548863 GAGE12BA1L429 117 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 GAGE12HA6NDE8 117 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 ELL2O00472 640 aaPredicted RBP6.55□□□□□ -1.36
CNOT2-215ENST00000548863 SEC24DO94855 1032 aaPredicted RBP6.55□□□□□ -1.36
CNOT2-215ENST00000548863 LY86O95711 162 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 ATP2A2P16615 1042 aaKnown RBP6.55□□□□□ -1.36
CNOT2-215ENST00000548863 SDSP20132 328 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 CD40P25942 277 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 GPR15P49685 360 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 CCDC178Q5BJE1 867 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 HECTD2Q5U5R9 776 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 OLFML1Q6UWY5 402 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 TAS1R1Q7RTX1 841 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 GPRIN1Q7Z2K8 1008 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 EFHBQ8N7U6 833 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 CDYL2Q8N8U2 506 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 OR5M3Q8NGP4 307 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
CNOT2-215ENST00000548863 IL17RAQ96F46 866 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 FAM193BQ96PV7 902 aaPredicted RBP6.55□□□□□ -1.36
CNOT2-215ENST00000548863 LSM14BQ9BX40 385 aaKnown RBP6.55□□□□□ -1.36
CNOT2-215ENST00000548863 SYNPO2LQ9H987 977 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 MAGEC2Q9UBF1 373 aaPredicted RBP6.55□□□□□ -1.36
CNOT2-215ENST00000548863 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 ZNHIT2Q9UHR6 403 aa6.55□□□□□ -1.36
CNOT2-215ENST00000548863 CDK11AQ9UQ88 783 aaPredicted RBP6.55□□□□□ -1.36
CNOT2-215ENST00000548863 CENPVL1A0A0U1RR11 272 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 F2P00734 622 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 CFBP00751 764 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 GZMKP49863 264 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 NFE2L2Q16236 605 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 LRCH2Q5VUJ6 765 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 ARHGEF19Q8IW93 802 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 BEND2Q8NDZ0 799 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 OSBPL2Q9H1P3 480 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 SERHL2Q9H4I8 314 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 ZNF768Q9H5H4 540 aaKnown RBP6.54□□□□□ -1.36
CNOT2-215ENST00000548863 CYP4F11Q9HBI6 524 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.54□□□□□ -1.36
CNOT2-215ENST00000548863 PTGFRNQ9P2B2 879 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 EIF2B4Q9UI10 523 aaKnown RBP6.54□□□□□ -1.36
CNOT2-215ENST00000548863 ZKSCAN5Q9Y2L8 839 aa6.54□□□□□ -1.36
CNOT2-215ENST00000548863 PCDH8O95206 1070 aa6.53□□□□□ -1.36
CNOT2-215ENST00000548863 PFKMP08237 780 aa6.53□□□□□ -1.36
CNOT2-215ENST00000548863 POU3F2P20265 443 aaPredicted RBP6.53□□□□□ -1.36
CNOT2-215ENST00000548863 ZEB1P37275 1124 aaPredicted RBP6.53□□□□□ -1.36
CNOT2-215ENST00000548863 CASRP41180 1078 aa6.53□□□□□ -1.36
CNOT2-215ENST00000548863 SF3A1Q15459 793 aaKnown RBP6.53□□□□□ -1.36
CNOT2-215ENST00000548863 GPR158Q5T848 1215 aa6.53□□□□□ -1.36
CNOT2-215ENST00000548863 DRICH1Q6PGQ1 229 aaPredicted RBP6.53□□□□□ -1.36
CNOT2-215ENST00000548863 Q6YL49 198 aa6.53□□□□□ -1.36
CNOT2-215ENST00000548863 SYNPOQ8N3V7 929 aa6.53□□□□□ -1.36
CNOT2-215ENST00000548863 LILRA3Q8N6C8 439 aaPredicted RBP6.53□□□□□ -1.36
CNOT2-215ENST00000548863 PMFBP1Q8TBY8 1022 aa6.53□□□□□ -1.36
CNOT2-215ENST00000548863 IFT57Q9NWB7 429 aa6.53□□□□□ -1.36
CNOT2-215ENST00000548863 CHST2Q9Y4C5 530 aa6.53□□□□□ -1.36
CNOT2-215ENST00000548863 DIRC3C9JPN6 131 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 RNASET2O00584 256 aaKnown RBP6.52□□□□□ -1.37
CNOT2-215ENST00000548863 BMPR1AP36894 532 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 PTTG1IPP53801 180 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 FAM189BP81408 668 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 DSG1Q02413 1049 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 ESPNLQ6ZVH7 1005 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 GDF7Q7Z4P5 450 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 ADGRG3Q86Y34 549 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 PASD1Q8IV76 773 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 ZNF496Q96IT1 587 aaPredicted RBP6.52□□□□□ -1.37
CNOT2-215ENST00000548863 BBC3Q96PG8 261 aaPredicted RBP6.52□□□□□ -1.37
CNOT2-215ENST00000548863 FDXACB1Q9BRP7 624 aaPredicted RBP6.52□□□□□ -1.37
CNOT2-215ENST00000548863 EPC1Q9H2F5 836 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 SYBUQ9NX95 663 aa6.52□□□□□ -1.37
CNOT2-215ENST00000548863 H2AFY2Q9P0M6 372 aaPredicted RBP6.52□□□□□ -1.37
CNOT2-215ENST00000548863 A0A1W2PR48 441 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms