RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 OFD1O75665 1012 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 EYA4O95677 639 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
BEST3-209ENST00000548658 SSTR3P32745 418 aaPredicted RBP12.64□□□□□ -0.39
BEST3-209ENST00000548658 BCAR1P56945 870 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 ERVFC1P60507 584 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 COASYQ13057 564 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 SMAD4Q13485 552 aaKnown RBP12.64□□□□□ -0.39
BEST3-209ENST00000548658 GIT2Q14161 759 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 SMAD2Q15796 467 aaKnown RBP12.64□□□□□ -0.39
BEST3-209ENST00000548658 RILPL1Q5EBL4 403 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 ADGRD2Q7Z7M1 963 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 RBM23Q86U06 439 aaKnown RBP12.64□□□□□ -0.39
BEST3-209ENST00000548658 SLC39A11Q8N1S5 342 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 TMX3Q96JJ7 454 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 FAM193BQ96PV7 902 aaPredicted RBP12.64□□□□□ -0.39
BEST3-209ENST00000548658 ENTPD7Q9NQZ7 604 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 TBC1D13Q9NVG8 400 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 LRWD1Q9UFC0 647 aa12.64□□□□□ -0.39
BEST3-209ENST00000548658 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.64□□□□□ -0.39
BEST3-209ENST00000548658 ARHGEF35A5YM69 484 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 H3BQV1 296 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 MBTPS2O43462 519 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 TSPAN1O60635 241 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 USO1O60763 962 aaKnown RBP12.63□□□□□ -0.39
BEST3-209ENST00000548658 ZC3H11AO75152 810 aaKnown RBP eCLIP12.63□□□□□ -0.39
BEST3-209ENST00000548658 TBX10O75333 385 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 MED24O75448 989 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 ALDH2P05091 517 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 ALADP13716 330 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 GLRA2P23416 452 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 GTF2F1P35269 517 aaKnown RBP eCLIP12.63□□□□□ -0.39
BEST3-209ENST00000548658 DLX2Q07687 328 aaPredicted RBP12.63□□□□□ -0.39
BEST3-209ENST00000548658 PTGDRQ13258 359 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 CAPSQ13938 189 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 SMC1AQ14683 1233 aaKnown RBP12.63□□□□□ -0.39
BEST3-209ENST00000548658 DUSP6Q16828 381 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 PADI6Q6TGC4 694 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 TMEM184AQ6ZMB5 413 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 ADHFE1Q8IWW8 467 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 MRPL43Q8N983 215 aaKnown RBP12.63□□□□□ -0.39
BEST3-209ENST00000548658 LPPQ93052 612 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 MSLNLQ96KJ4 702 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 PRIMPOLQ96LW4 560 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 TRIM6Q9C030 488 aaPredicted RBP12.63□□□□□ -0.39
BEST3-209ENST00000548658 CSRNP2Q9H175 543 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 POLR3FQ9H1D9 316 aaPredicted RBP12.63□□□□□ -0.39
BEST3-209ENST00000548658 RSAD1Q9HA92 442 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 INPP5FQ9Y2H2 1132 aa12.63□□□□□ -0.39
BEST3-209ENST00000548658 PLXNA4Q9HCM2 1894 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 HAX1O00165 279 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 PER2O15055 1255 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 LINC01565O15544 149 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 ITGA4P13612 1032 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 CYP11B2P19099 503 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 CCT6AP40227 531 aaKnown RBP12.62□□□□□ -0.39
BEST3-209ENST00000548658 PBX3P40426 434 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 PRPHP41219 470 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 MBTD1Q05BQ5 628 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 PPP2R5AQ15172 486 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 LONRF3Q496Y0 759 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 UBXN11Q5T124 520 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 KRT79Q5XKE5 535 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 MCTP1Q6DN14 999 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 DTHD1Q6ZMT9 781 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 AGMOQ6ZNB7 445 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 DDX53Q86TM3 631 aaKnown RBP12.62□□□□□ -0.39
BEST3-209ENST00000548658 ZBTB8OSQ8IWT0 167 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 KCTD17Q8N5Z5 321 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 C4orf32Q8N8J7 132 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 TMEM87AQ8NBN3 555 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 SMRP1Q8NCR6 262 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 ASAP3Q8TDY4 903 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 IGSF21Q96ID5 467 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 TBC1D32Q96NH3 1257 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 TMEM175Q9BSA9 504 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 C2orf40Q9H1Z8 148 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 NRDE2Q9H7Z3 1164 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 PRMT7Q9NVM4 692 aaPredicted RBP12.62□□□□□ -0.39
BEST3-209ENST00000548658 CLEC1BQ9P126 229 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 ARID2Q68CP9 1835 aa12.62□□□□□ -0.39
BEST3-209ENST00000548658 A0A087WWV3 80 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 A0A1B0GUA9 196 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 LRRIQ4A6NIV6 560 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 PI4K2BG5E9Z4 385 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 NR1I2O75469 434 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 GALTP07902 379 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 HOXB8P17481 243 aaPredicted RBP12.61□□□□□ -0.39
BEST3-209ENST00000548658 ARF4P18085 180 aaPredicted RBP12.61□□□□□ -0.39
BEST3-209ENST00000548658 TOB1P50616 345 aaPredicted RBP12.61□□□□□ -0.39
BEST3-209ENST00000548658 ZP2Q05996 745 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 CLUL1Q15846 466 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 PLPP4Q5VZY2 271 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 SLC27A1Q6PCB7 646 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 POTEGQ6S5H5 508 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 MAEAQ7L5Y9 396 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 VPS52Q8N1B4 723 aa12.61□□□□□ -0.39
BEST3-209ENST00000548658 IGSF22Q8N9C0 903 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms