RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RAB27AP51159 221 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 MAP3K12Q12852 859 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 PIN1Q13526 163 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-210ENST00000547654 LRRC41Q15345 812 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 SEPT7Q16181 437 aaKnown RBP5.46□□□□□ -1.54
SCAF11-210ENST00000547654 RNF219Q5W0B1 726 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-210ENST00000547654 PCSK4Q6UW60 755 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 APBB1IPQ7Z5R6 666 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-210ENST00000547654 DDX53Q86TM3 631 aaKnown RBP5.46□□□□□ -1.54
SCAF11-210ENST00000547654 TICAM2Q86XR7 235 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 KIF18BQ86Y91 864 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 HIPK4Q8NE63 616 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 ZMAT4Q9H898 229 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 AGO3Q9H9G7 860 aaKnown RBP5.46□□□□□ -1.54
SCAF11-210ENST00000547654 SLC5A4Q9NY91 659 aa5.46□□□□□ -1.54
SCAF11-210ENST00000547654 HECAQ9UBI9 543 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-210ENST00000547654 CTDP1Q9Y5B0 961 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-210ENST00000547654 GOLGA6CA6NDK9 693 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 GOLGA6BA6NDN3 693 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 AKAP10O43572 662 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 BRINP1O60477 761 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 F2P00734 622 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 JMJD7P0C870 316 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 GOLGA6DP0CG33 693 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 RGS3P49796 1198 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 NEK4P51957 841 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 FSTL1Q12841 308 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 MTMR1Q13613 665 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 MYBPC3Q14896 1274 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 TMEM132BQ14DG7 1078 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 EPHA7Q15375 998 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 PIK3R6Q5UE93 754 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 SPTY2D1Q68D10 685 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-210ENST00000547654 SLC4A10Q6U841 1118 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 SPATS2Q86XZ4 545 aaKnown RBP5.45□□□□□ -1.54
SCAF11-210ENST00000547654 SAMD3Q8N6K7 520 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 ELF4Q99607 663 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-210ENST00000547654 PITHD1Q9GZP4 211 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-210ENST00000547654 UBA5Q9GZZ9 404 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 ARNT2Q9HBZ2 717 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 GOLGA6AQ9NYA3 693 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 H2AFY2Q9P0M6 372 aaPredicted RBP5.45□□□□□ -1.54
SCAF11-210ENST00000547654 SH3BP1Q9Y3L3 701 aa5.45□□□□□ -1.54
SCAF11-210ENST00000547654 OPA1O60313 960 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 BMP5P22003 454 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 FLT3P36888 993 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 RALBP1Q15311 655 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 PCBP1Q15365 356 aaKnown RBP eCLIP5.44□□□□□ -1.54
SCAF11-210ENST00000547654 C4orf46Q504U0 113 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 SYCP2LQ5T4T6 812 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 PASD1Q8IV76 773 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 ULK2Q8IYT8 1036 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 KIAA1958Q8N8K9 716 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 CALML6Q8TD86 181 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 USP7Q93009 1102 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 CHMP4CQ96CF2 233 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 MAML3Q96JK9 1138 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 NRDE2Q9H7Z3 1164 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 ACSS2Q9NR19 701 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 OXSMQ9NWU1 459 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 SPO11Q9Y5K1 396 aa5.44□□□□□ -1.54
SCAF11-210ENST00000547654 A0A0A6YYK5 440 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-210ENST00000547654 FOXN1O15353 648 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 GPR39O43194 453 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 SH3BP5O60239 455 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 RPS6KA4O75676 772 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 EYA4O95677 639 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 LDHAP00338 332 aaKnown RBP5.43□□□□□ -1.54
SCAF11-210ENST00000547654 APEX1P27695 318 aaKnown RBP5.43□□□□□ -1.54
SCAF11-210ENST00000547654 MAN2A2P49641 1150 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 SCNN1GP51170 649 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 KIF11P52732 1056 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 SMAD3P84022 425 aaKnown RBP5.43□□□□□ -1.54
SCAF11-210ENST00000547654 TMPRSS15P98073 1019 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 ADAM15Q13444 863 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 STAT4Q14765 748 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 DHCR24Q15392 516 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 LONRF3Q496Y0 759 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 HSP90AB4PQ58FF6 505 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 LAIR1Q6GTX8 287 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 KSR2Q6VAB6 950 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 STRA8Q7Z7C7 330 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 C14orf80Q86SX3 495 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 PPP1R14CQ8TAE6 165 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 RABGGTAQ92696 567 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 LPPQ93052 612 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 MIEF2Q96C03 454 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 TTC1Q99614 292 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 SOX7Q9BT81 388 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 PUS7LQ9H0K6 701 aaKnown RBP5.43□□□□□ -1.54
SCAF11-210ENST00000547654 CDH19Q9H159 772 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 VWA7Q9Y334 891 aa5.43□□□□□ -1.54
SCAF11-210ENST00000547654 ZNF891A8MT65 544 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-210ENST00000547654 KPNA6O60684 536 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 CYP17A1P05093 508 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 CT47B1P0C2W7 299 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-210ENST00000547654 KRT4P19013 534 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 SLC9A1P19634 815 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 PTGS2P35354 604 aa5.42□□□□□ -1.54
SCAF11-210ENST00000547654 SESN2P58004 480 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms