RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 WNK4Q96J92 1243 aa16.81■□□□□ 0.28
BRF1-212ENST00000547562 ISCUQ9H1K1 167 aa16.81■□□□□ 0.28
BRF1-212ENST00000547562 ARID2Q68CP9 1835 aa16.81■□□□□ 0.28
BRF1-212ENST00000547562 GUCY2FP51841 1108 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 XRRA1Q6P2D8 792 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 IQCKQ8N0W5 287 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 SLC20A1Q8WUM9 679 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 TMEM117Q9H0C3 514 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 RNF146Q9NTX7 359 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 RIPK3Q9Y572 518 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 IVLP07476 585 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 MXI1P50539 228 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 MCCD1P59942 119 aaPredicted RBP16.8■□□□□ 0.28
BRF1-212ENST00000547562 BAATQ14032 418 aaPredicted RBP16.8■□□□□ 0.28
BRF1-212ENST00000547562 SAMD7Q7Z3H4 446 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 DEFB132Q7Z7B7 95 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 TMEM161BQ8NDZ6 487 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 RDM1Q8NG50 284 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 DDX47Q9H0S4 455 aaKnown RBP16.8■□□□□ 0.28
BRF1-212ENST00000547562 HACL1Q9UJ83 578 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 TTC7AQ9ULT0 858 aaPredicted RBP16.8■□□□□ 0.28
BRF1-212ENST00000547562 TBX20Q9UMR3 447 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 EXOC7Q9UPT5 735 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 USP20Q9Y2K6 914 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 PHIPQ8WWQ0 1821 aa16.8■□□□□ 0.28
BRF1-212ENST00000547562 BHMG1C9JSJ3 638 aaPredicted RBP16.79■□□□□ 0.28
BRF1-212ENST00000547562 SHOX2O60902 331 aaPredicted RBP16.79■□□□□ 0.28
BRF1-212ENST00000547562 ADRB2P07550 413 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 SMTNP53814 917 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 BACE1P56817 501 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 CUL1Q13616 776 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 TBC1D10BQ4KMP7 808 aaPredicted RBP16.79■□□□□ 0.28
BRF1-212ENST00000547562 CFAP58Q5T655 872 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 NBPF12Q5TAG4 269 aaPredicted RBP16.79■□□□□ 0.28
BRF1-212ENST00000547562 ZNF746Q6NUN9 644 aaPredicted RBP16.79■□□□□ 0.28
BRF1-212ENST00000547562 LRRC31Q6UY01 552 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 ANO5Q75V66 913 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 VSIG10LQ86VR7 867 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 MICALL2Q8IY33 904 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 MOV10L1Q9BXT6 1211 aaKnown RBP16.79■□□□□ 0.28
BRF1-212ENST00000547562 DOCK5Q9H7D0 1870 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 CCDC169A6NNP5 214 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 NFKBIEO00221 500 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 DDX3YO15523 660 aaKnown RBP16.79■□□□□ 0.28
BRF1-212ENST00000547562 ITGA4P13612 1032 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 CCND2P30279 289 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 ADSSP30520 456 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 BAG6P46379 1132 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 NPTX2P47972 431 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 SNRNP35Q16560 246 aaKnown RBP16.79■□□□□ 0.28
BRF1-212ENST00000547562 TTMPQ5BVD1 217 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 NLRX1Q86UT6 975 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 ARL8AQ96BM9 186 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 GPRASP2Q96D09 838 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 HVCN1Q96D96 273 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 SENP7Q9BQF6 1050 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 SLITRK6Q9H5Y7 841 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 COG5Q9UP83 839 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 DIS3Q9Y2L1 958 aaKnown RBP16.79■□□□□ 0.28
BRF1-212ENST00000547562 PCDHA10Q9Y5I2 948 aa16.79■□□□□ 0.28
BRF1-212ENST00000547562 GOLGA8IPA6NC78 632 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 GOLGA8JA6NMD2 632 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 NR3C2P08235 984 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 ECHS1P30084 290 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 HADHBP55084 474 aaKnown RBP16.78■□□□□ 0.28
BRF1-212ENST00000547562 DMP1Q13316 513 aaPredicted RBP16.78■□□□□ 0.28
BRF1-212ENST00000547562 CBWD2Q8IUF1 395 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 MAP4K3Q8IVH8 894 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 RHOT2Q8IXI1 618 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 ANKRD63C9JTQ0 380 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 HSPA9P38646 679 aaKnown RBP16.78■□□□□ 0.28
BRF1-212ENST00000547562 GMPSP49915 693 aaPredicted RBP16.78■□□□□ 0.28
BRF1-212ENST00000547562 HLTFQ14527 1009 aaKnown RBP eCLIP16.78■□□□□ 0.28
BRF1-212ENST00000547562 DCAF12L1Q5VU92 463 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 SCYL3Q8IZE3 742 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 KAT5Q92993 513 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 KIFC3Q9BVG8 833 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 CARD9Q9H257 536 aa16.78■□□□□ 0.28
BRF1-212ENST00000547562 FAM170AA1A519 330 aa16.77■□□□□ 0.28
BRF1-212ENST00000547562 ZNF233A6NK53 670 aa16.77■□□□□ 0.28
BRF1-212ENST00000547562 MAFGO15525 162 aa16.77■□□□□ 0.28
BRF1-212ENST00000547562 KRT14P02533 472 aa16.77■□□□□ 0.28
BRF1-212ENST00000547562 FGGP02679 453 aa16.77■□□□□ 0.28
BRF1-212ENST00000547562 FTLP02792 175 aaPredicted RBP16.77■□□□□ 0.28
BRF1-212ENST00000547562 CNGA1P29973 690 aa16.77■□□□□ 0.28
BRF1-212ENST00000547562 DCAF15Q66K64 600 aa16.77■□□□□ 0.28
BRF1-212ENST00000547562 RPUSD2Q8IZ73 545 aaKnown RBP16.77■□□□□ 0.28
BRF1-212ENST00000547562 REPS2Q8NFH8 660 aa16.77■□□□□ 0.28
BRF1-212ENST00000547562 AMACRQ9UHK6 382 aa16.77■□□□□ 0.28
BRF1-212ENST00000547562 ZNFX1Q9P2E3 1918 aaKnown RBP16.77■□□□□ 0.27
BRF1-212ENST00000547562 MYH9P35579 1960 aaKnown RBP16.77■□□□□ 0.27
BRF1-212ENST00000547562 DENND3A2RUS2 1198 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 MAP2K1Q02750 393 aaPredicted RBP16.77■□□□□ 0.27
BRF1-212ENST00000547562 SF3B2Q13435 895 aaKnown RBP16.77■□□□□ 0.27
BRF1-212ENST00000547562 SNRNP48Q6IEG0 339 aaKnown RBP16.77■□□□□ 0.27
BRF1-212ENST00000547562 OTUD6AQ7L8S5 288 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 MAATS1Q7Z4T9 603 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 CD302Q8IX05 232 aa16.77■□□□□ 0.27
BRF1-212ENST00000547562 FAM71AQ8IYT1 594 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms