RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 UNC80Q8N2C7 3258 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 CCDC169A6NNP5 214 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 GRM6O15303 877 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 PRKCBP05771 671 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 RB1P06400 928 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 LAG3P18627 525 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 NASPP49321 788 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 PEX3P56589 373 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 MAPK7Q13164 816 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 MAPK6Q16659 721 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 GLB1LQ6UWU2 654 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 LRRC55Q6ZSA7 311 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 C1orf186Q6ZWK4 172 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 USP49Q70CQ1 688 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 CDR2LQ86X02 465 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 KCTD17Q8N5Z5 321 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 KLHL23Q8NBE8 558 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 COLGALT1Q8NBJ5 622 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 SYMPKQ92797 1274 aaKnown RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 PGBD4Q96DM1 585 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 MRPL38Q96DV4 380 aaKnown RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 EPSTI1Q96J88 318 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 MRPL9Q9BYD2 267 aaKnown RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 TRIM6Q9C030 488 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 CCDC113Q9H0I3 377 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 CWH43Q9H720 699 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 ALG13Q9NP73 1137 aaKnown RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 PRMT7Q9NVM4 692 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 LMCD1Q9NZU5 365 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 IPPQ9Y573 584 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 PCDHB12Q9Y5F1 795 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 SRPRBQ9Y5M8 271 aaKnown RBP13.06□□□□□ -0.32
RAB5C-204ENST00000547517 CNTNAP2Q9UHC6 1331 aa13.06□□□□□ -0.32
RAB5C-204ENST00000547517 NPHP3-ACAD11A0A0J9YXS1 232 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 ZNF623O75123 536 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 NPTXRO95502 500 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 EDN1P05305 212 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 ITGB1P05556 798 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 PDIA4P13667 645 aaKnown RBP13.05□□□□□ -0.32
RAB5C-204ENST00000547517 GUCY2CP25092 1073 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 TXLNAP40222 546 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 PBX3P40426 434 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 NPTX2P47972 431 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
RAB5C-204ENST00000547517 PRPF4BQ13523 1007 aaKnown RBP13.05□□□□□ -0.32
RAB5C-204ENST00000547517 SLC39A14Q15043 492 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 TIGD5Q53EQ6 642 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 AGMOQ6ZNB7 445 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 GPBP1Q86WP2 473 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 THNSL1Q8IYQ7 743 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
RAB5C-204ENST00000547517 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
RAB5C-204ENST00000547517 RAD54LQ92698 747 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 P2RX5Q93086 422 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 PRIMPOLQ96LW4 560 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 TIPINQ9BVW5 301 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 CCSER1Q9C0I3 900 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 FZD8Q9H461 694 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 NXF3Q9H4D5 531 aaKnown RBP13.05□□□□□ -0.32
RAB5C-204ENST00000547517 RSAD1Q9HA92 442 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 BLOC1S4Q9NUP1 217 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 THEGQ9P2T0 379 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 TFIP11Q9UBB9 837 aaKnown RBP13.05□□□□□ -0.32
RAB5C-204ENST00000547517 PLAGL2Q9UPG8 496 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 USP20Q9Y2K6 914 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 HES2Q9Y543 173 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 ATG2AQ2TAZ0 1938 aa13.05□□□□□ -0.32
RAB5C-204ENST00000547517 SFI1A8K8P3 1242 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 ZC3H11AO75152 810 aaKnown RBP eCLIP13.04□□□□□ -0.32
RAB5C-204ENST00000547517 ITGA4P13612 1032 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 NCLP19338 710 aaKnown RBP13.04□□□□□ -0.32
RAB5C-204ENST00000547517 EFNA5P52803 228 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 RNASELQ05823 741 aaKnown RBP13.04□□□□□ -0.32
RAB5C-204ENST00000547517 MCM6Q14566 821 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 NOMO2Q5JPE7 1267 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 SLC27A1Q6PCB7 646 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 MRPL10Q7Z7H8 261 aaKnown RBP13.04□□□□□ -0.32
RAB5C-204ENST00000547517 CNNM3Q8NE01 707 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 URGCPQ8TCY9 931 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 LARP4BQ92615 738 aaKnown RBP13.04□□□□□ -0.32
RAB5C-204ENST00000547517 ZNF558Q96NG5 402 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 LMAN2LQ9H0V9 348 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 PDZD7Q9H5P4 517 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 KMT5AQ9NQR1 393 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 TBC1D13Q9NVG8 400 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 KCND2Q9NZV8 630 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
RAB5C-204ENST00000547517 CCDC39Q9UFE4 941 aa13.04□□□□□ -0.32
RAB5C-204ENST00000547517 MORC2Q9Y6X9 1032 aaPredicted RBP13.04□□□□□ -0.32
RAB5C-204ENST00000547517 PLXNA4Q9HCM2 1894 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms